miRBase entry: 23268654

Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression

PubMed ID 23268654
Authors Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
Journal BMC Genomics
Volume 13
Pages 727

There are 206 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
tgu-mir-1329 MI0013635 None chr3 99620780 99620866 + -
tgu-mir-2955 MI0013636 None chr1A 57982665 57982780 - -
tgu-mir-1451 MI0013637 None chr3 78313627 78313727 + -
tgu-mir-1677 MI0013638 None chr3 76231058 76231133 + -
tgu-mir-1805 MI0013639 None chr1 32735542 32735629 + -
tgu-mir-2956-1 MI0013640 None chr4A 17209002 17209082 - -
tgu-mir-2956-2 MI0013641 None chr4A 17209002 17209082 + -
tgu-mir-2958 MI0013643 None chr21 2262481 2262581 - -
tgu-mir-1784 MI0013644 None chr3 31872434 31872525 - -
tgu-mir-1662 MI0013646 None chr2 2943947 2944012 - -
tgu-mir-2960 MI0013647 None chr3 39458890 39458983 - -
tgu-mir-2962 MI0013649 None chr17 6428017 6428101 + -
tgu-mir-2963 MI0013650 None chr22_random 503984 504165 + -
tgu-mir-219b MI0013651 None chr17 5454921 5455078 - -
tgu-mir-146a MI0013652 None chr4 69209753 69209868 - -
tgu-mir-458 MI0013653 None chr13 1397261 1397340 - -
tgu-mir-1729 MI0013654 None chr15 8049890 8049991 - -
tgu-mir-2965 MI0013655 None chr7 10597644 10597708 - -
tgu-mir-456 MI0013656 None chr3 36454435 36454513 + -
tgu-mir-425 MI0013657 None chr12 12254268 12254356 + -
tgu-mir-1803 MI0013658 None chr2 97931879 97931967 + -
tgu-mir-2954 MI0013660 None chrZ 31606464 31606535 + -
tgu-mir-460b MI0013662 None chr4A 20408530 20408636 + -
tgu-mir-2969 MI0013664 None chr12 3102837 3102938 - -
tgu-mir-2970 MI0013665 None chr12 12254481 12254632 + -
tgu-mir-2188 MI0013666 None chr22 3239208 3239376 - -
tgu-mir-2971 MI0013667 None chr12 2419453 2419553 - -
tgu-mir-2972 MI0013668 None chr2 61107767 61107870 - -
tgu-mir-2973 MI0013669 None chrZ 43522129 43522205 - -
tgu-mir-2975 MI0013671 None chr26_random 475597 475677 - -
tgu-mir-2978 MI0013676 None chr18 7548428 7548489 - -
tgu-mir-2979-1 MI0013677 None chr1 47711423 47711509 - -
tgu-mir-2980-1 MI0013678 None chr2 61822032 61822111 - -
tgu-mir-2983 MI0013681 None chr5 14115790 14115863 + -
tgu-mir-2984 MI0013682 None chr1 39743243 39743336 - -
tgu-mir-2987 MI0013686 None chr12 776733 776812 + -
tgu-mir-129 MI0013688 None chr5 19791223 19791305 + -
tgu-mir-139 MI0013689 None chr1 113641295 113641379 - -
tgu-mir-363 MI0013690 None chr4A 7274550 7274638 + -
tgu-mir-9-2 MI0013691 None chrZ 12103943 12104015 - -
tgu-mir-9-1 MI0013692 None chr10 12969737 12969809 - -
tgu-mir-148a MI0013693 None chr2 52006663 52006774 - -
tgu-let-7i MI0013694 None chr1A 32383283 32383374 + -
tgu-mir-125-1 MI0013695 None chr1 109696652 109696723 + -
tgu-mir-125-2 MI0013696 None chr24 3113096 3113167 - -
tgu-mir-30b MI0013697 None chr3 84719838 84719910 + -
tgu-mir-124-1 MI0013698 None chr2 120492455 120492565 + -
tgu-mir-124-2 MI0013699 None chr3 111968090 111968160 + -
tgu-mir-124-3 MI0013700 None chr20 9826516 9826646 - -
tgu-mir-101-1 MI0013701 None chrZ 64083558 64083629 - -
tgu-mir-101-2 MI0013702 None chr8 26300517 26300588 - -
tgu-let-7b MI0013703 None chr1A 61564105 61564196 - -
tgu-mir-7-1 MI0013704 None chrZ 52731915 52731987 + -
tgu-mir-7-2 MI0013705 None chr10 13221462 13221534 - -
tgu-mir-7-3 MI0013706 None chr10 13225597 13225669 - -
tgu-mir-7-4 MI0013707 None chr28 3838836 3838928 - -
tgu-mir-100-1 MI0013708 None chr24 3146829 3146939 - -
tgu-mir-100-2 MI0013709 None chr24 3149999 3150109 - -
tgu-mir-221 MI0013710 None chr1 5261236 5261308 + -
tgu-mir-128-2 MI0013711 None chr2 28894377 28894486 - -
tgu-mir-128-1 MI0013712 None chr7 33186771 33186841 + -
tgu-mir-222-1 MI0013713 None chr1 5260725 5260798 + -
tgu-mir-222-2 MI0013714 None chrUn 1817289 1817362 + -
tgu-mir-138-1 MI0013715 None chr2 61107967 61108039 - -
tgu-mir-138-2 MI0013716 None chr11 5991080 5991172 - -
tgu-mir-26-1 MI0013717 None chr2 4696535 4696606 + -
tgu-mir-26-2 MI0013718 None chrUn 100873856 100873927 + -
tgu-mir-19b-1 MI0013719 None chr1 43202482 43202554 - -
tgu-mir-19b-2 MI0013720 None chr4A 7274224 7274296 + -
tgu-let-7e MI0013721 None chr26 532984 533075 - -
tgu-let-7a-1 MI0013722 None chr1A 61564945 61565036 - -
tgu-let-7a-3 MI0013723 None chr12 772013 772103 + -
tgu-let-7a-2 MI0013724 None chr24 3137431 3137522 - -
tgu-let-7a-4 MI0013725 None chr26 532798 532889 - -
tgu-let-7c-1 MI0013726 None chr1 109662682 109662773 + -
tgu-let-7c-2 MI0013727 None chrUn 52862184 52862275 + -
tgu-mir-30c MI0013728 None chr3 84746568 84746639 + -
tgu-mir-218-1 MI0013729 None chr4 54394615 54394725 - -
tgu-mir-218-2 MI0013730 None chr13 14950530 14950660 - -
tgu-mir-103-1 MI0013731 None chr13 14805606 14805718 - -
tgu-mir-103-2 MI0013732 None chr4 68894825 68894897 - -
tgu-mir-103-3 MI0013733 None chrUn 37745864 37745976 + -
tgu-mir-99-1 MI0013734 None chr1 109661967 109662037 + -
tgu-mir-99-2 MI0013735 None chrUn 52861469 52861539 + -
tgu-mir-2989-1 MI0013736 None chr8 3326534 3326623 - -
tgu-mir-2989-2 MI0013737 None chr8 3329105 3329194 - -
tgu-mir-1559 MI0013738 None chr7 27262570 27262701 - -
tgu-mir-21 MI0013739 None chr19 8993795 8993866 + -
tgu-let-7g-1 MI0013740 None chr12 6512028 6512119 - -
tgu-let-7g-2 MI0013741 None chrUn 123478082 123478173 - -
tgu-mir-122 MI0013742 None chrZ_random 328161 328232 + -
tgu-let-7f MI0013743 None chr12 772417 772508 + -
tgu-mir-383 MI0013744 None chr4 42215192 42215263 + -
tgu-mir-29a-1 MI0013745 None chr1A 2716218 2716288 + -
tgu-mir-29a-2 MI0013746 None chr26 3761359 3761429 + -
tgu-mir-451 MI0013747 None chr19 7265342 7265414 - -
tgu-mir-27 MI0013748 None chrZ 9900324 9900414 - -
tgu-mir-30a MI0013749 None chr23_random 192848 192939 + -
tgu-let-7d MI0013750 None chr12 773412 773503 + -
tgu-mir-34b MI0013751 None chr24 1752148 1752220 - -
tgu-mir-33 MI0013752 None chr1A 48937654 48937723 - -
tgu-mir-24 MI0013753 None chrZ 9899801 9899932 - -
tgu-mir-551 MI0013755 None chr9 23617065 23617135 - -
tgu-mir-338 MI0013756 None chr14 14972005 14972076 - -
tgu-mir-137 MI0013757 None chr8 8780107 8780179 + -
tgu-mir-126 MI0013758 None chr17 8833549 8833680 - -
tgu-mir-200a MI0013759 None chr21 5894308 5894400 + -
tgu-mir-181a-1 MI0013760 None chr8 5108663 5108735 - -
tgu-mir-181a-2 MI0013761 None chr17 10712187 10712259 + -
tgu-mir-490-1 MI0013763 None chrUn 87366743 87366835 + -
tgu-mir-490-2 MI0013764 None chr1A 58337862 58337954 + -
tgu-mir-2992 MI0013765 None chrZ 57612703 57612773 + -
tgu-mir-153-1 MI0013768 None chr2 9797628 9797699 - -
tgu-mir-153-2 MI0013769 None chr7 10584139 10584210 - -
tgu-mir-20a MI0013770 None chr1 43202624 43202696 - -
tgu-mir-142 MI0013771 None chr19 468507 468577 - -
tgu-mir-15a MI0013772 None chr1 55909891 55909961 + -
tgu-mir-107 MI0013773 None chr6 18493361 18493433 - -
tgu-mir-140 MI0013774 None chr11 11805159 11805230 + -
tgu-mir-194-1 MI0013775 None chr3 9653586 9653657 + -
tgu-mir-194-2 MI0013776 None chrUn 94526975 94527046 + -
tgu-mir-135a-1 MI0013777 None chr1A 45650428 45650500 + -
tgu-mir-135b MI0013778 None chr12 6536042 6536114 - -
tgu-mir-184 MI0013779 None chr10 20485747 20485858 + -
tgu-mir-1-2 MI0013780 None chr2 108164864 108164935 - -
tgu-mir-1-1 MI0013781 None chr20 10493672 10493743 - -
tgu-mir-181b-1 MI0013782 None chr8 5108479 5108552 - -
tgu-mir-181b-2 MI0013783 None chr17 10713241 10713314 + -
tgu-mir-17a MI0013784 None chr1 43203076 43203147 - -
tgu-mir-23 MI0013787 None chrZ 9900645 9900715 - -
tgu-mir-187 MI0013788 None chr2_random 838730 838799 + -
tgu-mir-204-1 MI0013791 None chrZ 16883812 16883883 + -
tgu-mir-204-2 MI0013792 None chr10 5338529 5338600 + -
tgu-mir-204-3 MI0013793 None chr28 1366327 1366418 - -
tgu-mir-204-4 MI0013794 None chr28 1367959 1368050 - -
tgu-mir-133-1 MI0013795 None chr2 108161719 108161789 - -
tgu-mir-133-2 MI0013796 None chr3 110618925 110618995 + -
tgu-mir-133-3 MI0013797 None chr20 10480781 10480851 - -
tgu-mir-375 MI0013798 None chr7 10362273 10362344 - -
tgu-mir-130a MI0013799 None chr15 8478910 8478981 + -
tgu-mir-92-1 MI0013800 None chr1 43202366 43202437 - -
tgu-mir-92-2 MI0013801 None chr4A 7274404 7274495 + -
tgu-mir-199-1 MI0013802 None chr17 5549805 5549875 + -
tgu-mir-216a MI0013803 None chr3 28149612 28149683 + -
tgu-mir-215 MI0013804 None chr3 9653905 9653975 + -
tgu-mir-130b MI0013805 None chr15 8487921 8488052 + -
tgu-mir-217 MI0013806 None chr3 28151737 28151809 + -
tgu-mir-454 MI0013807 None chr15 8486784 8486856 + -
tgu-mir-130c MI0013808 None chr19 8784984 8785095 - -
tgu-mir-365-1 MI0013809 None chr14 6788932 6789003 - -
tgu-mir-365-2 MI0013810 None chr18 11031436 11031547 + -
tgu-mir-16a MI0013811 None chr1 55910032 55910123 + -
tgu-mir-32 MI0013812 None chr2 89259080 89259150 - -
tgu-mir-193a MI0013813 None chr14 6793220 6793291 - -
tgu-mir-16c MI0013814 None chr4A 7178185 7178256 + -
tgu-mir-18a MI0013815 None chr1 43202937 43203008 - -
tgu-mir-16b MI0013816 None chr9 25555835 25555906 - -
tgu-mir-190 MI0013817 None chr10 3908501 3908572 - -
tgu-mir-106 MI0013818 None chr4A 7273746 7273818 + -
tgu-mir-20b MI0013819 None chr4A 7274092 7274164 + -
tgu-mir-200b MI0013820 None chr21 5892896 5892968 + -
tgu-mir-216b MI0013821 None chr3 28144514 28144584 + -
tgu-mir-1388 MI0013822 None chr20 8822103 8822194 - -
tgu-mir-301 MI0013823 None chr19 8783990 8784062 - -
tgu-mir-144 MI0013824 None chr19 7265533 7265602 - -
tgu-mir-15b MI0013825 None chr9 25555991 25556061 - -
tgu-mir-34a MI0013826 None chr21 5249928 5249999 + -
tgu-mir-223 MI0013827 None chr4A 6644931 6645001 - -
tgu-mir-29b-1 MI0013830 None chr1A 2715204 2715274 + -
tgu-mir-29b-2 MI0013831 None chr26 3760396 3760466 + -
tgu-mir-146b MI0013832 None chr6 22623576 22623647 + -
tgu-mir-214 MI0013833 None chr8_random 1635714 1635805 + -
tgu-mir-2997 MI0013834 None chr20 6709318 6709385 + -
tgu-mir-203 MI0013835 None chr5 52214055 52214186 + -
tgu-mir-147 MI0013836 None chr10 10438197 10438266 + -
tgu-mir-18b MI0013837 None chr4A 7273805 7273936 + -
tgu-mir-193b MI0013838 None chr18 11017822 11017890 + -
tgu-mir-146c MI0013839 None chr13 11635088 11635159 + -
tgu-mir-455 MI0013840 None chr17 5173177 5173247 + -
tgu-mir-19a MI0013841 None chr1 43202791 43202860 - -
tgu-mir-155 MI0013842 None chr1 112588974 112589044 + -
tgu-mir-30d MI0013843 None chr2 149540698 149540769 - -
tgu-mir-460a MI0013844 None chr2 1092239 1092320 - -
tgu-mir-205 MI0013846 None chr1A 622279 622359 - -
tgu-mir-199-2 MI0013847 None chr8_random 1629749 1629876 + -
tgu-mir-135a-2 MI0013848 None chr26_random 713415 713500 - -
tgu-mir-489 MI0013849 None chr2 25436279 25436376 - -
tgu-mir-15c MI0013850 None chr4A 7177772 7177853 + -
tgu-mir-2979-2 MI0013852 None chrUn 140548829 140548915 + -
tgu-mir-2980-2 MI0013853 None chrUn 19256347 19256426 + -
tgu-mir-204-5 MI0015938 None None None -
tgu-mir-34c-1 MI0015939 None chr24 1752711 1752787 - -
tgu-mir-34c-2 MI0015969 None chrUn 76202851 76202927 - -
tgu-mir-10a MI0016248 None chr7 17079281 17079392 + -
tgu-mir-183 MI0022170 None chr1A 193617 193692 - -
tgu-mir-196 MI0022171 None chr2 52627136 52627210 - -
tgu-mir-499 MI0022173 None chr20 3206374 3206451 - -
tgu-mir-1397 MI0022174 None chr1 21937138 21937221 + -
tgu-mir-1467-1 MI0022176 None chr2 142442502 142442594 - -
tgu-mir-30e MI0022188 None chr2 149534042 149534120 - -
tgu-mir-7643 MI0024980 None chr1 95578094 95578205 + -
tgu-mir-7644 MI0024981 None chr3 57588392 57588504 - -
tgu-mir-7645 MI0024982 None chr20 10603505 10603616 + -
tgu-mir-1467-2 MI0031748 None chrUn 165189797 165189889 + -
tgu-mir-25 MI0016246 None chr2 142309692 142309770 - -
tgu-mir-192 MI0016247 None chr8 22188980 22189064 + -



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