Stem-loop tgu-mir-205

Accession

MI0013846

Description

Taeniopygia guttata tgu-mir-205 precursor miRNA

Sequence

gccuuccuggugCCCUUCAUUCCACCGGAAUCUGucgaugcagaacccggauuucagugaaaugaagccccucagaaaggc
(((((.((((.(..(((((((.(((.((((((((((......))...)))))))).))).)))))))..).)))).)))))

Structure

     c    u CC       C   C        ---  ga 
gccuu cugg g  CUUCAUU CAC GGAAUCUG   uc  u
||||| |||| |  ||||||| ||| ||||||||   ||   
cggaa gacu c  gaaguaa gug cuuuaggc   ag  g
     a    c cc       a   a        cca  ac 

Annotation confidence Not enough data

Genome context

chr1A: 622279-622359 [-]

Mature tgu-miR-205

• Accession: MIMAT0014616
• Description: Taeniopygia guttata tgu-miR-205 mature miRNA
• Sequence: 13 - CCCUUCAUUCCACCGGAAUCUG - 34
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727