Stem-loop tgu-mir-2965

Accession

MI0013655

Description

Taeniopygia guttata tgu-mir-2965 precursor miRNA

Sequence

cugugcugccuguugcucuggggcuccagcugCAGGACUGCCUCAGAGAGCAGgcuggugaacag
((((((((((((((.((((((((((((.......)))..)))))))))))))))).)))..))))

Structure

    --   -       g         --   ag 
cugu  gcu gccuguu cucuggggc  ucc  c
||||  ||| ||||||| |||||||||  |||  u
gaca  ugg cgGACGA GAGACUCCG  AGG  g
    ag   u       -         UC   AC 

Annotation confidence Not enough data

Genome context

chr7: 10597644-10597708 [-]

Mature tgu-miR-2965

• Accession: MIMAT0014468
• Description: Taeniopygia guttata tgu-miR-2965 mature miRNA
• Sequence: 33 - CAGGACUGCCUCAGAGAGCAG - 53
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727