Stem-loop tgu-mir-1451

Accession

MI0013637

Description

Taeniopygia guttata tgu-mir-1451 precursor miRNA

Sequence

gagcaagcgcaggagcugcugccUCGCACAGGAGCAAAUUACCGCGuucagcuaauccgCAGUAACUUGCUCCUGUGAGAgguagcggcuccuggcuccuc
(((..(((.((((((((((((((((.(((((((((((.((((.(((...........))).)))).))))))))))).))))))))))))))))))).)))

Structure

   ca   g                G           A    C   uuca 
gag  agc caggagcugcugccUC CACAGGAGCAA UUAC GCG    g
|||  ||| |||||||||||||||| ||||||||||| |||| |||    c
cuc  ucg guccucggcgauggAG GUGUCCUCGUU AAUG Cgc    u
   -c   -                A           C    A   cuaa 

Annotation confidence Not enough data

Genome context

chr3: 78313627-78313727 [+]

Mature tgu-miR-1451-5p

• Accession: MIMAT0014451
• Description: Taeniopygia guttata tgu-miR-1451-5p mature miRNA
• Sequence: 24 - UCGCACAGGAGCAAAUUACCGCG - 46
• Evidence: experimental ; Illumina [1-2]

Mature tgu-miR-1451-3p

• Accession: MIMAT0026958
• Description: Taeniopygia guttata tgu-miR-1451-3p mature miRNA
• Sequence: 60 - CAGUAACUUGCUCCUGUGAGA - 80
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727