Stem-loop tgu-mir-2975

Accession

MI0013671

Description

Taeniopygia guttata tgu-mir-2975 precursor miRNA

Sequence

ggagcacuuaAAAGGAAAGGUGUGGAUCCAUcagagggaagcgggaaucgauggauccauccuuuccuuucaugcugcuuc
(((((((...((((((((((.(((((((((((.((............)))))))))))))))))))))))...).))))))

Structure

      - uua          U           a  gggaa 
ggagca c   AAAGGAAAGG GUGGAUCCAUc ga     g
|||||| |   |||||||||| ||||||||||| ||      
cuucgu g   uuuccuuucc uaccuagguag cu     c
      c uac          -           -  aaggg 

Annotation confidence Not enough data

Genome context

chr26_random: 475597-475677 [-]

Mature tgu-miR-2975

• Accession: MIMAT0014485
• Description: Taeniopygia guttata tgu-miR-2975 mature miRNA
• Sequence: 11 - AAAGGAAAGGUGUGGAUCCAU - 31
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727