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Identification and characteristics of microRNAs from Bombyx mori |
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|---|---|
| PubMed ID | 18507836 |
| Authors | He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y |
| Journal | BMC Genomics |
| Volume | 9 |
| Pages | 248 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| bmo-let-7 | MI0004968 | 17656 | NW_004582019.1 | 3373685 | 3373788 | - | High |
| bmo-mir-1a | MI0004969 | 148495 | NW_004582020.1 | 5628055 | 5628139 | - | - |
| bmo-mir-7 | MI0004970 | 719 | NW_004582035.1 | 2817062 | 2817146 | + | - |
| bmo-mir-8 | MI0004971 | 4919 | NW_004582017.1 | 79866 | 79967 | + | High |
| bmo-mir-9a | MI0004972 | 415 | NW_004582229.1 | 9274 | 9363 | - | High |
| bmo-mir-10 | MI0004973 | 1726 | NW_004582018.1 | 2516858 | 2516941 | - | High |
| bmo-mir-14 | MI0004974 | 446 | NW_004582033.1 | 1273977 | 1274056 | - | High |
| bmo-mir-34 | MI0004975 | 267 | NW_004581681.1 | 3813355 | 3813452 | - | High |
| bmo-mir-263b | MI0004977 | 11 | NW_004581687.1 | 1534394 | 1534482 | + | - |
| bmo-mir-263a | MI0004978 | 55247 | NW_004582020.1 | 2312197 | 2312291 | - | High |
| bmo-mir-275 | MI0004979 | 1813 | NW_004582013.1 | 1926698 | 1926783 | + | - |
| bmo-mir-276 | MI0004980 | 18057 | None | None | High | ||
| bmo-mir-277 | MI0004981 | 538 | NW_004581681.1 | 3821386 | 3821507 | - | High |
| bmo-mir-279a | MI0004982 | 119 | NW_004581691.1 | 11805 | 11889 | + | - |
| bmo-mir-282 | MI0004983 | 27 | NW_004581722.1 | 736220 | 736304 | - | High |
| bmo-mir-283 | MI0004984 | 479 | NW_004581701.1 | 692153 | 692235 | - | High |
| bmo-mir-305 | MI0004985 | 191 | NW_004582013.1 | 1926822 | 1926912 | + | High |
| bmo-mir-307 | MI0004986 | 16 | NW_004582026.1 | 4749629 | 4749724 | - | - |
| bmo-mir-31 | MI0005377 | 3150 | NW_004581778.1 | 423738 | 423858 | + | High |
| bmo-mir-71 | MI0005378 | 64 | NW_004582015.1 | 7707526 | 7707644 | - | High |
| bmo-mir-2a-1 | MI0008338 | 390 | NW_004582015.1 | 7692561 | 7692650 | - | High |
| bmo-mir-2a-2 | MI0008339 | 291 | NW_004582015.1 | 7692153 | 7692232 | - | High |
| bmo-mir-2b | MI0008340 | 72 | NW_004582015.1 | 7692030 | 7692105 | - | High |
| bmo-mir-13a | MI0008341 | 25 | NW_004582015.1 | 7692416 | 7692494 | - | - |
| bmo-mir-13b | MI0008342 | 88 | NW_004582015.1 | 7692288 | 7692367 | - | High |
| bmo-mir-79 | MI0008343 | 743 | NW_004581774.1 | 31444 | 31543 | + | - |
| bmo-mir-87 | MI0008344 | 34 | NW_004581697.1 | 299073 | 299173 | + | - |
| bmo-mir-133 | MI0008345 | 4 | NW_004582020.1 | 5611904 | 5612004 | - | - |
| bmo-mir-184 | MI0008346 | 303 | NW_004582034.1 | 4769236 | 4769319 | - | - |
| bmo-mir-210 | MI0008347 | 2 | NW_004582008.1 | 4476417 | 4476508 | + | - |
| bmo-mir-281 | MI0008348 | 6348 | NW_004582034.1 | 1683515 | 1683591 | + | High |
| bmo-mir-317 | MI0008349 | 1925 | NW_004581681.1 | 3841495 | 3841586 | - | High |
| bmo-bantam | MI0008350 | 2175 | NW_004582023.1 | 2305314 | 2305403 | + | - |
| dme-mir-1 | MI0000116 | 107366 | chr2L | 20487441 | 20487531 | + | High |
| dme-mir-2a-1 | MI0000117 | 11749 | chr2L | 19569897 | 19569972 | - | High |
| dme-mir-2a-2 | MI0000118 | 16640 | chr2L | 19569490 | 19569561 | - | High |
| dme-mir-2b-1 | MI0000119 | 9716 | chr2L | 8258616 | 8258692 | - | High |
| dme-mir-2b-2 | MI0000120 | 10189 | chr2L | 19570182 | 19570264 | - | High |
| dme-mir-7 | MI0000127 | 4215 | chr2R | 20606067 | 20606154 | + | High |
| dme-mir-8 | MI0000128 | 57465 | chr2R | 16831432 | 16831518 | + | High |
| dme-mir-9a | MI0000129 | 8876 | chr3L | 19565131 | 19565208 | + | High |
| dme-mir-13a | MI0000133 | 856 | chr3R | 15417542 | 15417616 | - | High |
| dme-mir-13b-1 | MI0000134 | 7335 | chr3R | 15417408 | 15417475 | - | High |
| dme-mir-13b-2 | MI0000135 | 7665 | chrX | 9091230 | 9091299 | + | High |
| dme-mir-14 | MI0000136 | 52805 | chr2R | 9553762 | 9553824 | + | High |
| dme-mir-263a | MI0000343 | 4635 | chr2L | 11953410 | 11953503 | - | - |
| dme-mir-184 | MI0000354 | 120037 | chr2R | 13329402 | 13329501 | - | High |
| dme-mir-275 | MI0000356 | 3405 | chr2L | 7425795 | 7425892 | + | High |
| dme-mir-276a | MI0000359 | 51649 | chr3L | 10365228 | 10365325 | + | High |
| dme-mir-277 | MI0000360 | 22508 | chr3R | 10100022 | 10100121 | + | High |
| dme-mir-133 | MI0000362 | 1370 | chr2L | 20616617 | 20616714 | + | High |
| dme-mir-279 | MI0000363 | 14159 | chr3R | 29215585 | 29215684 | + | High |
| dme-mir-276b | MI0000375 | 14614 | chr3L | 10319785 | 10319883 | + | High |
| dme-mir-100 | MI0000378 | 245 | chr2L | 18471434 | 18471533 | + | High |
| dme-mir-263b | MI0000383 | 551 | chr3L | 15843406 | 15843495 | - | High |
| dme-mir-289 | MI0000385 | 0 | chr3L | 13620822 | 13620920 | + | - |
| dme-bantam | MI0000387 | 54356 | chr3L | 642208 | 642288 | + | High |
| dme-mir-31b | MI0000410 | 1314 | chrX | 8993305 | 8993431 | - | High |
| dme-mir-305 | MI0000412 | 12557 | chr2L | 7425972 | 7426044 | + | High |
| dme-mir-9c | MI0000413 | 13645 | chr2L | 16697924 | 16698015 | + | High |
| dme-mir-9b | MI0000415 | 5894 | chr2L | 16698744 | 16698834 | + | High |
| dme-let-7 | MI0000416 | 7587 | chr2L | 18472034 | 18472111 | + | High |
| dme-mir-31a | MI0000420 | 7133 | chr2R | 17783795 | 17783886 | - | High |
| dme-mir-2c | MI0000431 | 2932 | chr3R | 15417744 | 15417845 | - | High |
| bmo-mir-9b | MI0010004 | 2 | NW_004581774.1 | 31448 | 31537 | - | - |
| bmo-mir-9c | MI0012193 | 3998 | NW_004581774.1 | 28981 | 29088 | + | High |
| bmo-mir-100 | MI0012291 | 16771 | NW_004582019.1 | 3376172 | 3376313 | - | - |
| bmo-mir-279d | MI0012297 | 110 | NW_004582019.1 | 739120 | 739195 | + | - |
| bmo-mir-279b | MI0012298 | 5250 | NW_004581681.1 | 2936576 | 2936652 | + | High |
| bmo-mir-279c | MI0012299 | 11385 | NW_004581681.1 | 2936836 | 2936915 | + | - |
| bmo-mir-9d | MI0012307 | 2 | NW_004581684.1 | 354559 | 354643 | - | - |
| bmo-mir-1b | MI0012994 | 27 | NW_004582020.1 | 5628058 | 5628136 | + | - |
| bmo-mir-279e | MI0014278 | None | NW_004582009.1 | 6127664 | 6127769 | - | - |