Accession
MI0000133
Description
Drosophila melanogaster
dme-mir-13a precursor miRNA
Literature search
12 open access papers mention dme-mir-13a
(26 sentences)
(26 sentences)
Sequence
16741
reads,
674
reads per million, 49 experiments
uacguaaCUCCUCAAAGGGUUGUGAAAUGucgacuauuaucuacucaUAUCACAGCCAUUUUGAUGAGUuucgug
((((.(((((.((((((((((((((.(((................))).)))))))).)))))).))))).))))
((((.(((((.((((((((((((((.(((................))).)))))))).)))))).))))).))))
Structure
u C - A ucgacua
uacg aaCUC UCAAAG GGUUGUGA AUG u
|||| ||||| |||||| |||||||| |||
gugc uUGAG AGUUUU CCGACACU Uac u
u U A A ucaucua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3R: 15417542-15417616 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dme-mir-13a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-13a-3p
| Accession | MIMAT0000118 |
| Description | Drosophila melanogaster dme-miR-13a-3p mature miRNA |
| Sequence | 48 - UAUCACAGCCAUUUUGAUGAGU - 69 |
| Evidence |
experimental
cloned [1], Northern [1-2], 454 [3-4], Illumina [4] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-13a-5p
| Accession | MIMAT0020795 |
| Description | Drosophila melanogaster dme-miR-13a-5p mature miRNA |
| Sequence | 8 - CUCCUCAAAGGGUUGUGAAAUG - 29 |
| Evidence | not_experimental |
| Database links |
|
References
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