Accession
MI0000134
Description
Drosophila melanogaster
dme-mir-13b-1 precursor miRNA
Literature search
13 open access papers mention dme-mir-13b-1
(41 sentences)
(41 sentences)
Sequence
313907
reads,
6646
reads per million, 49 experiments
ccaugUCGUUAAAAUGUUUGUGAACUUAUGuauucacaaucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((..........)))))))))).)))))))))))...)))
(((..(((((((((((.((((((...((((..........)))))))))).)))))))))))...)))
Structure
-ug U ACU uauu cca UCGUUAAAAUG UUGUGA UAUG c ||| ||||||||||| |||||| |||| ggu AGCAGUUUUAC GACACU AUac a uUG C --- uaac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3R: 15417408-15417475 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dme-mir-13b-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-13b-3p
| Accession | MIMAT0000119 |
| Description | Drosophila melanogaster dme-miR-13b-3p mature miRNA |
| Sequence | 43 - UAUCACAGCCAUUUUGACGAGU - 64 |
| Evidence |
experimental
Northern [1-2], cloned [3], 454 [4-5], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-13b-1-5p
| Accession | MIMAT0020796 |
| Description | Drosophila melanogaster dme-miR-13b-1-5p mature miRNA |
| Sequence | 6 - UCGUUAAAAUGUUUGUGAACUUAUG - 30 |
| Evidence | not_experimental |
| Database links |
|
References
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