Accession
MI0000383
Description
Drosophila melanogaster
dme-mir-263b precursor miRNA mir-263
Gene
family?
family?
RF00706;
mir-263
Literature search
6 open access papers mention dme-mir-263b
(66 sentences)
(66 sentences)
Sequence
11247
reads,
340
reads per million, 44 experiments
uugcugacuuugaguCUUGGCACUGGGAGAAUUCACaguugacuuuauuauucuGUGGUUCUGCGGGUGCCAAAACuuaaaaaccggcuu
..((((..(((((((.((((((((.(.(((((.(((((..............)))))))))).).)))))))).)))))))...))))..
..((((..(((((((.((((((((.(.(((((.(((((..............)))))))))).).)))))))).)))))))...))))..
Structure
uu -ac C G G U uugacu gcug uuugagu UUGGCACU G AGAAU CACag u |||| ||||||| |||||||| | ||||| ||||| cggc aaauuCA AACCGUGG C UCUUG GUGuc u uu caa A G G - uuauua
Annotation confidence
High
Do you think this miRNA is real?
Comments
miR-263b was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the ends of the excised miRNA by cloning.
Genome context
chr3L: 15843406-15843495 [-]
Database links
Mature dme-miR-263b-5p
| Accession | MIMAT0000362 |
| Description | Drosophila melanogaster dme-miR-263b-5p mature miRNA |
| Sequence | 16 - CUUGGCACUGGGAGAAUUCAC - 36 |
| Evidence |
experimental
cloned [2], 454 [3-4], Illumina [4] |
| Database links |
|
| Predicted targets |
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Mature dme-miR-263b-3p
| Accession | MIMAT0020822 |
| Description | Drosophila melanogaster dme-miR-263b-3p mature miRNA |
| Sequence | 55 - GUGGUUCUGCGGGUGCCAAAAC - 76 |
| Evidence | not_experimental |
| Database links |
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References
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