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microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula |
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|---|---|
| PubMed ID | 23572382 |
| Authors | "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N" |
| Journal | "Planta |
| Volume | 238 |
| Pages | 91-105 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| mtr-MIR166a | MI0001740 | None | chr1 | 19059643 | 19059763 | - | High |
| mtr-MIR319a | MI0001751 | None | chr5 | 31290518 | 31290724 | + | High |
| mtr-MIR156b | MI0005571 | None | chr1 | 4445878 | 4445972 | - | High |
| mtr-MIR166b | MI0005575 | None | chr2 | 950526 | 950695 | - | High |
| mtr-MIR156c | MI0005584 | None | chr3 | 36762577 | 36762674 | + | High |
| mtr-MIR156d | MI0005585 | None | chr3 | 37487558 | 37487647 | - | High |
| mtr-MIR166e | MI0005594 | None | chr8 | 27465367 | 27465472 | - | High |
| mtr-MIR319b | MI0005596 | None | chr5 | 2188491 | 2188670 | + | High |
| mtr-MIR156g | MI0005607 | None | chr6 | 18847298 | 18847417 | - | High |
| mtr-MIR156h | MI0005613 | None | chr7 | 24257584 | 24257677 | + | High |
| mtr-MIR166f | MI0005614 | None | chr7 | 26018024 | 26018202 | - | High |
| mtr-MIR166g | MI0005618 | None | chr8 | 6508264 | 6508370 | - | High |
| mtr-MIR171e | MI0005620 | None | chr4 | 39704652 | 39704744 | + | High |
| mtr-MIR396a | MI0005621 | None | chr4 | 39789612 | 39789704 | + | High |
| mtr-MIR396b | MI0005622 | None | chr4 | 39798253 | 39798347 | - | High |
| mtr-MIR156i | MI0005626 | None | chr4 | 46126859 | 46126951 | - | High |
| mtr-MIR1510b | MI0010540 | None | chr5 | 18612353 | 18612588 | + | High |
| mtr-MIR2087 | MI0010544 | None | chr2 | 13519918 | 13520182 | - | Low |
| mtr-MIR2088 | MI0010545 | None | chr8 | 15599389 | 15599534 | - | High |
| mtr-MIR2592b | MI0011815 | None | chr2 | 4195488 | 4195736 | + | High |
| mtr-MIR2592s | MI0011826 | None | chr6 | 18079450 | 18079703 | + | Low |
| mtr-MIR2111d | MI0011838 | None | None | None | High | ||
| mtr-MIR2111e | MI0011839 | None | chr7 | 16678770 | 16678875 | - | High |
| mtr-MIR2111m | MI0011844 | None | chr7 | 16637685 | 16637791 | - | High |
| mtr-MIR5212 | MI0018252 | None | chr2 | 11616948 | 11617032 | - | High |
| mtr-MIR5214 | MI0018254 | None | chr3 | 1385082 | 1385180 | - | Medium |
| mtr-MIR482 | MI0018337 | None | AC235678.1 | 65790 | 65893 | + | High |
| mtr-MIR408 | MI0019094 | None | chr1 | 22930123 | 22930247 | + | High |
| mtr-MIR172d | MI0025218 | None | contig_53419 | 1969 | 2086 | + | High |
| mtr-MIR319c | MI0025219 | None | contig_50311 | 658 | 746 | + | Medium |
| mtr-MIR319d | MI0025220 | None | chr3 | 19927077 | 19927283 | + | High |
| mtr-MIR397 | MI0025221 | None | contig_103871 | 626 | 745 | - | High |
| mtr-MIR7696a | MI0025222 | None | AC225474.24 | 39292 | 39379 | + | High |
| mtr-MIR7696b | MI0025223 | None | AC225474.24 | 39289 | 39381 | - | High |
| mtr-MIR7696c | MI0025224 | None | AC225474.24 | 39293 | 39378 | + | High |
| mtr-MIR7696d | MI0025225 | None | AC225474.24 | 39292 | 39379 | - | High |
| mtr-MIR7697 | MI0025226 | None | chr3 | 16805134 | 16805406 | + | Medium |
| mtr-MIR7698 | MI0025227 | None | chr5 | 10368446 | 10368588 | - | Low |
| mtr-MIR7699 | MI0025228 | None | chr1 | 21146007 | 21146133 | + | Low |
| mtr-MIR7700 | MI0025229 | None | chr3 | 26045881 | 26046790 | + | Low |
| mtr-MIR169l | MI0025230 | None | None | None | High | ||
| mtr-MIR399s | MI0025231 | None | chr8 | 23989511 | 23989633 | + | - |
| mtr-MIR399t | MI0025232 | None | chr8 | 24156521 | 24156643 | + | - |
| mtr-MIR2592bo | MI0025233 | None | chr4 | 43332476 | 43332721 | - | Low |
| mtr-MIR2592bp | MI0025234 | None | chr5 | 934556 | 934780 | + | Low |
| mtr-MIR2592bq | MI0025235 | None | chr5 | 3215835 | 3216081 | + | Low |
| mtr-MIR2592br | MI0025236 | None | chr2 | 15307805 | 15308050 | + | Low |
| mtr-MIR7701 | MI0025237 | None | chr8 | 10522328 | 10522672 | - | Low |