miRBase entry: 15885146

Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing

PubMed ID 15885146
Authors "Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L"
Journal "BMC Genomics
Volume 6
Pages 70

There are 54 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
ssc-mir-105-1 MI0002410 1 chrX 141091501 141091581 - -
ssc-mir-105-2 MI0002411 1 chrX 141093619 141093698 - -
ssc-mir-106a MI0002412 20 chrX 126200183 126200263 - -
ssc-mir-122 MI0002413 4 chr1 179916336 179916420 - -
ssc-mir-125b-2 MI0002414 595 None None -
ssc-mir-135-1 MI0002415 23 chr13 37564051 37564140 + -
ssc-mir-135-2 MI0002416 14 chr5 90552047 90552146 - -
ssc-mir-145 MI0002417 4593 chr2 157346127 157346212 + High
ssc-mir-148a MI0002418 1113 chr18 51216035 51216102 + High
ssc-mir-15b MI0002419 66 chr13 108388133 108388230 + -
ssc-mir-181b-2 MI0002420 67 chr1 299324014 299324099 + -
ssc-mir-184 MI0002421 0 chr7 53883626 53883708 + -
ssc-mir-19a MI0002422 635 chr11 66610343 66610424 + -
ssc-mir-20a MI0002423 736 chr11 66610513 66610583 + -
ssc-mir-216-1 MI0002424 2 chr3 90058975 90059079 + -
ssc-mir-217-1 MI0002425 39 chr3 90065707 90065813 + -
ssc-mir-224 MI0002426 0 chrX 140860060 140860140 - -
ssc-mir-23a MI0002427 341 chr2 65581838 65581907 + -
ssc-mir-24-1 MI0002428 1148 chr2 65582174 65582245 + High
ssc-mir-26a MI0002429 1295 chrUScaf3878 40640 40723 + -
ssc-mir-28 MI0002430 121 chr13 135461289 135461374 + High
ssc-mir-29b-1 MI0002431 57 chr18 19034822 19034902 + -
ssc-mir-301 MI0002432 0 None None -
ssc-mir-323 MI0002433 2 None None -
ssc-mir-326 MI0002434 0 chr9 10800191 10800281 - -
ssc-mir-7-2 MI0002435 168 chr10 35113341 35113449 + -
ssc-mir-95 MI0002436 56 chr8 4277238 4277318 + -
ssc-mir-140 MI0002437 401 chrUScaf726 107288 107357 + High
ssc-mir-181c MI0002438 119 chr2 65553664 65553750 - -
ssc-mir-183 MI0002439 509 chr18 20030651 20030720 + -
ssc-mir-205 MI0002440 12 chr9 146808292 146808360 - -
ssc-mir-214 MI0002441 135 chr9 126099461 126099570 - High
ssc-mir-27a MI0002442 430 chr2 65582015 65582096 + -
ssc-mir-32 MI0002443 87 chr1 280645137 280645206 - -
ssc-mir-325 MI0002444 0 chrX 69436727 69436820 + -
ssc-let-7c MI0002445 389 chr13 191559336 191559429 + -
ssc-let-7f-1 MI0002446 1108 chrX 51801728 51801810 - -
ssc-let-7i MI0002447 995 chr5 30021224 30021308 + -
ssc-mir-103-1 MI0002448 652 chr16 59912617 59912698 + -
ssc-mir-107 MI0002449 81 chr14 110407095 110407181 - -
ssc-mir-124a-2 MI0002450 0 chr14 14443005 14443089 - -
ssc-mir-128-1 MI0002451 52 chr15 18661614 18661695 - -
ssc-mir-136 MI0002452 22 chr7 132079194 132079275 + -
ssc-mir-139 MI0002453 51 chr9 7935635 7935702 - -
ssc-mir-153 MI0002454 13 None None -
ssc-mir-18a MI0002455 46 chr11 66610195 66610286 + -
ssc-mir-186 MI0002456 217 chr6 131558966 131559047 + -
ssc-mir-196a-2 MI0002457 0 chr5 19654956 19655062 - -
ssc-mir-204 MI0002458 27 chr1 250527017 250527125 - -
ssc-mir-21 MI0002459 6294 chr12 37340385 37340476 + High
ssc-mir-29c MI0002460 123 chr9 148552997 148553084 + -
ssc-mir-30c-2 MI0002461 343 chr1 57721688 57721767 - -
ssc-mir-9-1 MI0002462 119 chr4 102543210 102543298 - -
ssc-mir-9-2 MI0002463 119 chr2 98744572 98744658 - -



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