Accession
MI0002424
Description
Sus scrofa
ssc-mir-216-1 precursor miRNA
Literature search
4 open access papers mention ssc-mir-216-1
(6 sentences)
(6 sentences)
Sequence
1
reads,
2
reads per million, 1 experiments
gauggcugugaguuggcuUAAUCUCAGCUGGCAACUGUGAGauguucauacaaucccccacaguggucucugggauuaugcuaaacagagcaauuuccuugcccu
....(((.((..(((((.(((((((((..(((.((((((.(((((....)).)))...)))))).))).))))))))).))))).)).)))..............
....(((.((..(((((.(((((((((..(((.((((((.(((((....)).)))...)))))).))).))))))))).))))).)).)))..............
Structure
----------gaug g ag u CU A --A - u
gcu ug uuggc UAAUCUCAG GGC ACUGUG Gau gu c
||| || ||||| ||||||||| ||| |||||| ||| ||
cga ac aaucg auuaggguc cug ugacac cua ca a
ucccguuccuuuaa g -a u -u g ccc a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr3: 90058975-90059079 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-216-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-216
| Accession | MIMAT0002130 |
| Description | Sus scrofa ssc-miR-216 mature miRNA |
| Sequence | 19 - UAAUCUCAGCUGGCAACUGUGAG - 41 |
| Evidence |
experimental
Illumina [1] |
References
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