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mir-218 family (RF00255)

Summary
miR-218 appears to be a vertebrate specific microRNA and has now been been predicted and experimentally confirmed in a wide range of vertebrate species (MIR:MIPF0000026). The extents of the hairpin precursors are not known. In this case the mature sequence in excised from the 5'arm of the hairpin.

There are 75 hairpins in the mir-218 family

Name Accession RPM Chromosome Start End Strand Confidence
hsa-mir-218-1 MI0000294 1697 chr4 20528275 20528384 + High
hsa-mir-218-2 MI0000295 1561 chr5 168768146 168768255 - High
mmu-mir-218-1 MI0000700 1446 5 48381284 48381393 + Medium
mmu-mir-218-2 MI0000701 1396 11 35507643 35507752 + High
rno-mir-218a-2 MI0000957 311 chr10 20428661 20428770 + High
rno-mir-218a-1 MI0000958 310 chr14 66923083 66923192 - Medium
gga-mir-218-1 MI0001212 197 4 74570186 74570294 - High
gga-mir-218-2 MI0001237 198 13 4203872 4203966 + High
dre-mir-218a-1 MI0002051 96 chr14 24562801 24562883 - Medium
dre-mir-218a-2 MI0002052 84 chr1 23866878 23866965 + Medium
dre-mir-218b MI0002053 8 chr10 17695265 17695340 + High
ggo-mir-218 MI0002868 - chr4 20063744 20063853 + -
age-mir-218 MI0002869 - None None -
ppa-mir-218-1 MI0002870 - chr4 20222397 20222506 + -
lca-mir-218 MI0002871 - None None -
ppy-mir-218-1 MI0002872 - chr4 20528531 20528640 + -
ptr-mir-218-1 MI0002873 - chr4 20855976 20856085 + Medium
sla-mir-218-1 MI0002874 - None None -
lla-mir-218-1 MI0002875 - None None -
mne-mir-218-1 MI0002876 - None None -
ppa-mir-218-2 MI0002877 - chr5 170894489 170894598 - -
ppy-mir-218-2 MI0002878 - chr5 171408121 171408233 - -
ptr-mir-218-2 MI0002879 - chr5 169306830 169306939 - High
mml-mir-218-2 MI0002880 108 6 166169527 166169636 - High
sla-mir-218-2 MI0002881 - None None -
lla-mir-218-2 MI0002882 - None None -
mne-mir-218-2 MI0002883 - None None -
fru-mir-218b MI0003307 - ref|NC_042290.1| 11211587 11211662 - -
tni-mir-218b MI0003308 - 4 1554664 1554739 + -
fru-mir-218a-1 MI0003317 - ref|NC_042298.1| 12300621 12300703 - High
tni-mir-218a-1 MI0003318 - 1 5655172 5655254 - -
fru-mir-218a-2 MI0003390 - ref|NC_042301.1| 6572601 6572684 - Medium
tni-mir-218a-2 MI0003391 - 18 234301 234384 + -
xtr-mir-218-1 MI0004871 - 1 29787498 29787606 + Medium
xtr-mir-218-2 MI0004872 - 3 33295738 33295821 + -
bta-mir-218-2 MI0005017 52 20 554570 554631 - Medium
mdo-mir-218-1 MI0005322 103 ref|NC_077231.2| 207092815 207092923 - High
oan-mir-218-1 MI0006673 222 18 37929458 37929575 - Medium
mml-mir-218-1 MI0007675 102 5 19496234 19496338 + High
cfa-mir-218-1 MI0008079 - 3 90029028 90029091 - Medium
cfa-mir-218-2 MI0008097 - 4 43432368 43432431 + High
bta-mir-218-1 MI0009780 65 6 40087130 40087239 + Medium
oan-mir-218-2 MI0012559 217 X1 21569468 21569549 + High
eca-mir-218-1 MI0012683 9 3 105377070 105377131 - Medium
eca-mir-218-2 MI0012810 9 14 11396076 11396138 + High
tgu-mir-218-1 MI0013729 - chr4 54394615 54394725 - -
tgu-mir-218-2 MI0013730 - chr13 14950530 14950660 - -
ssc-mir-218-1 MI0015924 29 chr8 15443762 15443845 - Medium
pma-mir-218a-1 MI0017115 - ref|NC_046098.1| 3240010 3240088 + -
pma-mir-218a-2 MI0017116 - ref|NC_046077.1| 12174134 12174225 - -
pma-mir-218b MI0017117 - ref|NC_046079.1| 14082486 14082575 - -
ssc-mir-218b MI0017989 23 chr16 59686628 59686711 + High
aca-mir-218-1 MI0018822 - chr5 75691609 75691707 - -
aca-mir-218-2 MI0018823 - chr1 112860786 112860883 - -
ola-mir-218a-1 MI0019414 - 1 17054065 17054169 - High
ola-mir-218a-2 MI0019472 - 10 1526115 1526205 + High
ola-mir-218b MI0019488 - 12 14121562 14121651 - High
cgr-mir-218a MI0020462 115 JH000047.1 925537 925616 + -
ssc-mir-218-2 MI0022143 29 chrUScaf1267 26754 26835 - Medium
ccr-mir-218a MI0023372 - None None Medium
ccr-mir-218b MI0023373 - None None High
mdo-mir-218-2 MI0023860 102 ref|NC_077227.1| 374200490 374200553 - High
ipu-mir-218a-1 MI0024578 - None None -
ipu-mir-218a-2 MI0024579 - None None -
ipu-mir-218b MI0024580 - None None -
oar-mir-218a MI0025267 581 chr16 577231 577292 - Medium
ssa-mir-218-1 MI0026618 - None None High
ssa-mir-218-2 MI0026619 - None None High
efu-mir-218a MI0028721 - JH977622.1 1963823 1963906 + Medium
efu-mir-218b MI0028755 - JH977653.1 4277455 4277538 + -
chi-mir-218 MI0030694 - chr20 583380 583489 - High
tch-mir-218-1 MI0031172 - KB321165.1 2299760 2299823 + Medium
tch-mir-218-2 MI0031289 - KB321165.1 2300959 2301022 + Medium
oha-mir-218-1 MI0031419 - AZIM01000557.1 744088 744195 - -
oha-mir-218-2 MI0031420 - AZIM01000153.1 403906 404006 + -



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