Stem-loop efu-mir-218a

Accession

MI0028721

Description

Eptesicus fuscus efu-mir-218a precursor miRNA

Sequence

24720 reads, 536.0 reads per million, 8 experiments

agauuuucugUUGUGCUUGAUCUAACCAUGUGGUUgccagguaugaguaAAACAUGGUUCCGUCAAGCACcauggaacgucacg
.(((.((((((.(((((((((..((((((((..((((((....)).)))).))))))))..))))))))).)))))).)))...

Structure

--a   u      U         CU        GG    -  g 
   gau uucugU GUGCUUGAU  AACCAUGU  UUgc ca g
   ||| |||||| |||||||||  ||||||||  |||| ||  
   cug aaggua CACGAACUG  UUGGUACA  Aaug gu u
gca   c      c         CC        -A    a  a 

Annotation confidence Medium

Genome context

JH977622.1: 1963823-1963906 [+]

Mature efu-miR-218a-5p

• Accession: MIMAT0035036
• Description: Eptesicus fuscus efu-miR-218a-5p mature miRNA
• Sequence: 11 - UUGUGCUUGAUCUAACCAUGUGGUU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-218a-3p

• Accession: MIMAT0058824
• Description: Eptesicus fuscus efu-miR-218a-3p mature miRNA
• Sequence: 50 - AAACAUGGUUCCGUCAAGCAC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545