Stem-loop tni-mir-218b

Accession

MI0003308

Description

Tetraodon nigroviridis tni-mir-218b precursor miRNA

Sequence

caggaccccaUUGUGCUUGAUCUAACCAUGCAgugcguccuguguccaugguugugccaagcaccuuggaggcuug
((((.(((((..(((((((...(((((((((((......)))....))))))))...)))))))..))).))))))

Structure

    a  -   UU       AUC        ----   ug 
cagg cc cca  GUGCUUG   UAACCAUG    CAg  c
|||| || |||  |||||||   ||||||||    |||   
guuc gg ggu  cacgaac   guugguac    guc  g
    -  a   uc       cgu        cugu   cu 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

4: 1554664-1554739 [+]

Mature tni-miR-218b

• Accession: MIMAT0002986
• Description: Tetraodon nigroviridis tni-miR-218b mature miRNA
• Sequence: 11 - UUGUGCUUGAUCUAACCAUGCA - 32
• Evidence: not_experimental

References