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Identification and characterization of novel microRNAs from Schistosoma japonicum |
|
|---|---|
| PubMed ID | 19107204 |
| Authors | Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W |
| Journal | PLoS One |
| Volume | 3 |
| Pages | e4034 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| sja-let-7 | MI0010668 | None | CABF01067189.1 | 5854 | 5927 | + | - |
| sja-mir-71a | MI0010669 | None | CABF01007682.1 | 3056 | 3135 | - | - |
| sja-bantam | MI0010670 | None | None | None | - | ||
| sja-mir-125a | MI0010671 | None | CABF01024723.1 | 7689 | 7772 | + | - |
| sja-mir-125b | MI0010672 | None | CABF01027351.1 | 4363 | 4440 | - | - |
| sma-let-7 | MI0010673 | None | Chr_7 | 5118791 | 5118863 | + | - |
| sma-mir-71a | MI0010674 | None | Chr_W | 22875654 | 22875735 | + | - |
| sma-bantam | MI0010675 | None | SC_0137 | 369443 | 369514 | + | - |
| sma-mir-125a | MI0010676 | None | Chr_1 | 38691263 | 38691344 | - | - |
| sma-mir-125b | MI0010677 | None | Chr_1.unplaced.SC_0071 | 1248571 | 1248645 | + | - |
| gga-let-7i | MI0001168 | 753 | chr1 | 33060797 | 33060880 | + | High |
| gga-let-7a-3 | MI0001171 | 73726 | chr1 | 71291481 | 71291556 | + | High |
| gga-let-7b | MI0001172 | 13203 | chr1 | 71292310 | 71292394 | + | High |
| gga-let-7c | MI0001174 | 12632 | chr1 | 99018794 | 99018877 | + | High |
| gga-mir-125b-2 | MI0001175 | 6293 | chr1 | 99051079 | 99051168 | + | High |
| gga-let-7g | MI0001230 | 4570 | chr12 | 2971911 | 2971993 | - | High |
| gga-let-7d | MI0001232 | 130 | chr12 | 6091058 | 6091160 | - | High |
| gga-let-7f | MI0001233 | 33796 | chr12 | 6092103 | 6092189 | - | High |
| gga-let-7a-1 | MI0001234 | 72969 | chr12 | 6092517 | 6092606 | - | High |
| gga-let-7a-2 | MI0001259 | 72699 | chr24 | 3343196 | 3343267 | + | High |
| gga-let-7j | MI0001262 | 73377 | chr26 | 1639928 | 1640010 | - | - |
| gga-let-7k | MI0001263 | 40055 | chr26 | 1640128 | 1640210 | - | High |
| sja-mir-71b | MI0015291 | None | CABF01011791.1 | 2817 | 2909 | + | - |
| gga-mir-125b-1 | MI0029337 | 6039 | chr24 | 3360814 | 3360905 | + | High |
| gga-let-7l-1 | MI0040762 | 1540 | AADN04005513.1 | 10244 | 10320 | - | - |
| gga-let-7l-2 | MI0040769 | 1540 | AADN04020204.1 | 2008 | 2088 | - | - |