miRBase entry: bmo-mir-184

Stem-loop bmo-mir-184


Accession
MI0008346
Description
Bombyx mori bmo-mir-184 precursor miRNA
Gene family
MIPF0000059; mir-184

Literature search
7 open access papers mention bmo-mir-184
(15 sentences)

Sequence

1833 reads, 303 reads per million, 3 experiments
gugcagugacgugcCCUUGUCAUUCUUCAGGCCCUGuguauuuacaacuACUGGACGGAGAACUGAUAAGGGCacgccguguac
(((((..(.(((((((((((((((((((.(..((.((((.......)).)).)).))))))).))))))))))))))..)))))

Structure
     gu a             -      A GC  U  -  au 
gugca  g cgugcCCUUGUCA UUCUUC G  CC Gu gu  u
|||||  | ||||||||||||| |||||| |  || || ||  u
caugu  c gcaCGGGAAUAGU AAGAGG C  GG CA ca  a
     gc -             C      - -A  U  u  ac 


Annotation confidence Not enough data
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Genome context
NW_004582034.1: 4769236-4769319 [-]

Database links

Mature bmo-miR-184-5p

Accession MIMAT0015276
Description Bombyx mori bmo-miR-184-5p mature miRNA
Sequence 15 - CCUUGUCAUUCUUCAGGCCCUG - 36
Evidence experimental
Illumina [3]

Mature bmo-miR-184-3p

Accession MIMAT0007902
Description Bombyx mori bmo-miR-184-3p mature miRNA
Sequence 50 - ACUGGACGGAGAACUGAUAAGGGC - 73
Evidence experimental
RT-PCR [2], Illumina [3]
Database links

References

  1. PubMed ID: 18507836
    Identification and characteristics of microRNAs from Bombyx mori
    He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y
    BMC Genomics (2008) 9:248

  2. PubMed ID: 18977439
    Identification of conserved microRNAs in Bombyx mori (silkworm) and regulation of fibroin L chain production by microRNAs in heterologous system
    "Cao J, Tong C, Wu X, Lv J, Yang Z, Jin Y"
    "Insect Biochem Mol Biol (2008) 38:1066-1071

  3. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148