miRBase entry: bmo-mir-2733e-3

Stem-loop bmo-mir-2733e-3


Accession
MI0015937
Description
Bombyx mori bmo-mir-2733e-3 precursor miRNA
Gene family
MIPF0000766; mir-2733

Literature search
2 open access papers mention bmo-mir-2733e-3
(5 sentences)

Sequence

11 reads, 4 reads per million, 1 experiments
uuugcuggacugucuauaaugucuuucaacaauagcuauuacuucuccagaagacauucacauucugUCACUGGGAAUGUAAUAGCUAUuuccaaaauu
.(((..((((..........))))..))).(((((((((((((((.((((..((((.........)))).))))))).)))))))))))).........

Structure
uuugcuggacugucuauaaugucuuucaac            -   u    aa    uuc 
                              aauagcuauuac uuc ccag  gaca   a
                              |||||||||||| ||| ||||  ||||   c
                              uUAUCGAUAAUG AAG GGUC  CUgu   a
---------------------uuaaaaccu            U   -    -A    cuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bmo-miR-2733e

Accession MIMAT0013617
Description Bombyx mori bmo-miR-2733e mature miRNA
Sequence 68 - UCACUGGGAAUGUAAUAGCUAU - 89
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 20089182
    Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
    Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
    BMC Genomics (2010) 11:52