miRBase entry: bmo-mir-2768

Stem-loop bmo-mir-2768


Accession
MI0012323
Description
Bombyx mori bmo-mir-2768 precursor miRNA


Sequence

303 reads, 66 reads per million, 3 experiments
gucgggcgacCGGUGAAAUAUUUUGACCAAUUuuauauaucggucugaucguugacucaaggugaAUUGGUUAAGAUAUUGCAUCGUuugcucgauc
(((((((((.(((((.(((((((((((((((((........((((........))))......))))))))))))))))).))))).))))))))).

Structure
-         c     A                 uauauauc    uga 
 gucgggcga CGGUG AAUAUUUUGACCAAUUu        gguc   u
 ||||||||| ||||| |||||||||||||||||        ||||    
 uagcucguu GCUAC UUAUAGAAUUGGUUAag        ucag   c
c         U     G                 --uggaac    uug 


Annotation confidence Not enough data
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Genome context
NW_004582034.1: 4213060-4213156 [-]

Database links

Mature bmo-miR-2768-5p

Accession MIMAT0013646
Description Bombyx mori bmo-miR-2768-5p mature miRNA
Sequence 11 - CGGUGAAAUAUUUUGACCAAUU - 32
Evidence experimental
Illumina [1], SOLID [2]

Mature bmo-miR-2768-3p

Accession MIMAT0013647
Description Bombyx mori bmo-miR-2768-3p mature miRNA
Sequence 66 - AUUGGUUAAGAUAUUGCAUCGU - 87
Evidence experimental
Illumina [1], SOLID [2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415