miRBase entry: bmo-mir-2766

Stem-loop bmo-mir-2766


Accession
MI0012320
Description
Bombyx mori bmo-mir-2766 precursor miRNA
Gene family
MIPF0001608; mir-2766

Literature search
5 open access papers mention bmo-mir-2766
(7 sentences)

Sequence

79126 reads, 14775 reads per million, 3 experiments
cauuacucguCCGCCCUUCGUCUUGACUGGCGcugucgcuugcaUCAGUCUUGUCGAAUGGUGggugaguuuc
....(((((((((((.((((.(..((((((.((........)).))))))..).)))).)))))))))))...

Structure
cauu           C    U UU      C  ugu 
    acucguCCGCC UUCG C  GACUGG Gc   c
    ||||||||||| |||| |  |||||| ||    
    ugaguggGUGG AAGC G  CUGACU cg   g
-cuu           U    U UU      a  uuc 


Annotation confidence High
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Genome context
NW_004581756.1: 163308-163380 [-]

Database links

Mature bmo-miR-2766-5p

Accession MIMAT0013641
Description Bombyx mori bmo-miR-2766-5p mature miRNA
Sequence 11 - CCGCCCUUCGUCUUGACUGGCG - 32
Evidence experimental
Illumina [1-2]
Database links

Mature bmo-miR-2766-3p

Accession MIMAT0013642
Description Bombyx mori bmo-miR-2766-3p mature miRNA
Sequence 45 - UCAGUCUUGUCGAAUGGUG - 63
Evidence experimental
Illumina [1-2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 20089182
    Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
    Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
    BMC Genomics (2010) 11:52