Stem-loop bmo-mir-2756

Accession

MI0012309

Description

Bombyx mori bmo-mir-2756 precursor miRNA

Gene family

MIPF0001391; mir-2756

Literature search

2 open access papers mention bmo-mir-2756
(2 sentences)

Sequence

16894 reads, 3345 reads per million, 3 experiments

ucaguugcacACCCUGUAGCUGCCAAGGGGCGcagcuuaauuccgCCCCUCGGCUGCUACAUUGUAUgcuacugaau
(((((.(((.((..((((((.(((.(((((((...........))))))).))).))))))..)).))).)))))..

Structure

--     u   c  CC      U   A       cagc 
  ucagu gca AC  UGUAGC GCC AGGGGCG    u
  ||||| ||| ||  |||||| ||| |||||||    u
  aguca cgU UG  ACAUCG CGG UCCCCgc    a
ua     u   A  UU      U   C       cuua 

Annotation confidence High

Genome context

NW_004581715.1: 1320630-1320706 [-]

Mature bmo-miR-2756-5p

• Accession: MIMAT0013623
• Description: Bombyx mori bmo-miR-2756-5p mature miRNA
• Sequence: 11 - ACCCUGUAGCUGCCAAGGGGCG - 32
• Evidence: experimental ; Illumina [1], SOLID [2]

Mature bmo-miR-2756-3p

• Accession: MIMAT0013624
• Description: Bombyx mori bmo-miR-2756-3p mature miRNA
• Sequence: 46 - CCCCUCGGCUGCUACAUUGUAU - 67
• Evidence: experimental ; Illumina [1], SOLID [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415