miRBase entry: bmo-mir-2733d

Stem-loop bmo-mir-2733d


Accession
MI0012305
Description
Bombyx mori bmo-mir-2733d precursor miRNA
Gene family
MIPF0000766; mir-2733

Literature search
1 open access papers mention bmo-mir-2733d
(6 sentences)

Sequence

28 reads, 3 reads per million, 3 experiments
cucucuguaaugcagucaucauacucacaguugauauguuugacauucuaUCACUGGGUGUAUGAAGAUUGUgguacagaga
.((((((((.(((((((.((((((.(.((((.(((((((...)))...)))))))).).)))))).))))))).))))))))

Structure
c        a       a      u a    u    ---   u 
 ucucugua ugcaguc ucauac c cagu gaua   ugu  
 |||||||| ||||||| |||||| | |||| ||||   ||| u
 agagacau gUGUUAG AGUAUG G GUCA CUau   aca  
-        g       A      U G    -    cuu   g 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature bmo-miR-2733d

Accession MIMAT0013618
Description Bombyx mori bmo-miR-2733d mature miRNA
Sequence 51 - UCACUGGGUGUAUGAAGAUUGU - 72
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148

  2. PubMed ID: 20089182
    Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
    Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
    BMC Genomics (2010) 11:52