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miRBase |
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Stem-loop sequence bmo-mir-31 |
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Accession | MI0005377 (change log) | ||||
Description | Bombyx mori miR-31 stem-loop | ||||
Gene family | MIPF0000064; mir-31 | ||||
Literature search |
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5 open access papers mention bmo-mir-31 | ||||
Stem-loop |
------------------------guc -c aa aa c uugaa 5' gagccggugg uggg ggc gaagu ggcauagcugu u |||||||||| |||| ||| ||||| ||||||||||| a 3' uucggccgcc acuc ccg cuuca cugugucggca a ucguaggcguuuagaacuuuaacuucu ua ga ag - cauag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence bmo-miR-31-5p |
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Accession | MIMAT0004213 |
Previous IDs | bmo-miR-31 |
Sequence |
21 - ggcaagaagucggcauagcug - 41 |
Deep sequencing | 17808 reads, 3 experiments |
Evidence | experimental; Northern [2], cloned [3], RT-PCR [4], Illumina [5] |
Database links |
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Mature sequence bmo-miR-31-3p |
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Accession | MIMAT0015242 |
Previous IDs | bmo-miR-31* |
Sequence |
58 - ggcugugucacuucgagccagc - 79 |
Deep sequencing | 29 reads, 2 experiments |
Evidence | experimental; Illumina [5] |
Database links |
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References |
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1 |
PMID:16972323
"Computational prediction of microRNA genes in silkworm genome"
J Zhejiang Univ Sci B. 7:806-816(2006).
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2 |
PMID:18507836
"Identification and characteristics of microRNAs from Bombyx mori"
BMC Genomics. 9:248(2008).
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3 |
PMID:18714353
"The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages"
PLoS One. 3:e2997(2008).
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4 |
PMID:18977439
"Identification of conserved microRNAs in Bombyx mori (silkworm) and regulation of fibroin L chain production by microRNAs in heterologous system"
Insect Biochem Mol Biol. 38:1066-1071(2008).
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5 |
PMID:20199675
"MicroRNAs of Bombyx mori identified by Solexa sequencing"
BMC Genomics. 11:148(2010).
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