Stem-loop pde-MIR1314

Accession

MI0022115

Description

Pinus densata pde-MIR1314 precursor miRNA

Literature search

1 open access papers mention pde-MIR1314
(1 sentences)

Sequence

gucauguugguuagaugaaggaauucuucaacauuagaggccgauguggaguuaugcucuugaCCGGCCUCGAAUGUUAGGAGAAuguuuuccucuaccuaagca
....(((((((.(((.(((((.(((((((((((((.(((((((....(((((...)))))....))))))).)))))).))))))).))))).))))))..))))

Structure

guca    --   u   u     a       -      a       augu     u 
    uguu  ggu aga gaagg auucuuc aacauu gaggccg    ggagu  
    ||||  ||| ||| ||||| ||||||| |||||| |||||||    ||||| a
    acga  cca ucu cuuuu uAAGAGG UUGUAA CUCCGGC    ucucg  
----    au   -   c     g       A      G       Cagu     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR1314

• Accession: MIMAT0025351
• Description: Pinus densata pde-miR1314 mature miRNA
• Sequence: 64 - CCGGCCUCGAAUGUUAGGAGAA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132