Stem-loop pde-MIR1311

Accession

MI0022112

Description

Pinus densata pde-MIR1311 precursor miRNA

Literature search

1 open access papers mention pde-MIR1311
(4 sentences)

Sequence

guaggaacaggcggacuggcauaacuccgcccauauuuuacugucagagauggUCAGAGUUUUGCCAGUUCCGCCcauuccuacug
(((((((..((((((((((((.(((((.(.((((.((((......)))))))).).))))).)))))).))))))..)))))))..

Structure

--       ca      -      u     c c    a    ac 
  guaggaa  ggcgga cuggca aacuc g ccau uuuu  u
  |||||||  |||||| |||||| ||||| | |||| ||||   
  cauccuu  CCGCCU GACCGU UUGAG C ggua gaga  g
gu       ac      U      U     A U    -    cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR1311

• Accession: MIMAT0025348
• Description: Pinus densata pde-miR1311 mature miRNA
• Sequence: 54 - UCAGAGUUUUGCCAGUUCCGCC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132