Stem-loop pde-MIR950

Accession

MI0022106

Description

Pinus densata pde-MIR950 precursor miRNA

Literature search

1 open access papers mention pde-MIR950
(2 sentences)

Sequence

gaaggugaucuuuacaUCUGGUCCACGGUGGUUUAUuguucaucguuuguuuaugauaaaccaucgugccgcagaugauaagagcaccuuc
(((((((.((((..((((((...((((((((((((((((.((.....))...))))))))))))))))...))))))..)))).)))))))

Structure

       a    ua      GUC                --u  u 
gaaggug ucuu  caUCUG   CACGGUGGUUUAUugu   ca c
||||||| ||||  ||||||   ||||||||||||||||   || g
cuuccac agaa  guagac   gugcuaccaaauagua   gu u
       g    ua      gcc                uuu  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR950

• Accession: MIMAT0025342
• Description: Pinus densata pde-miR950 mature miRNA
• Sequence: 17 - UCUGGUCCACGGUGGUUUAU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132