Stem-loop pde-MIR949b

Accession

MI0022105

Description

Pinus densata pde-MIR949b precursor miRNA

Gene family

MIPF0001455; MIR949

Sequence

agagccUCUCCGGGAAUCCAAUGCGCCuuccucuugaacgccuuucaacgcgcagacugugcgugaaaacgcuuuuaggaggaagguguauugauuuccggggaagcccu
((.((.((((((((((((.(((((((((((((((((((.((.(((((.((((((...)))))))))))..)).))))))))))))))))))))))))))))))).)).))

Structure

  a  c            C                   c  -c     a      g 
ag gc UCUCCGGGAAUC AAUGCGCCuuccucuugaa gc  uuuca cgcgca  
|| || |||||||||||| ||||||||||||||||||| ||  ||||| |||||| a
uc cg aggggccuuuag uuauguggaaggaggauuu cg  aaagu gcgugu  
  c  a            -                   u  ca     -      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR949b

• Accession: MIMAT0025341
• Description: Pinus densata pde-miR949b mature miRNA
• Sequence: 7 - UCUCCGGGAAUCCAAUGCGCC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132