Stem-loop pde-MIR166a

Accession

MI0022091

Description

Pinus densata pde-MIR166a precursor miRNA

Literature search

1 open access papers mention pde-MIR166a
(10 sentences)

Sequence

ggggaauguugucuggcucgaggccauccugaaaauaguccacccccgguucuuuugggguuuuuuuggaugccgUCGGACCAGGCUUCAUUCC
..((((((..((((((.(((((((.((((.(((((......(((((.((....)).)))))))))).))))))).)))).))))))..))))))

Structure

gg      uu      c    -   c    u     uagucc     c  u 
  ggaaug  gucugg ucga ggc aucc gaaaa      acccc gg u
  ||||||  |||||| |||| ||| |||| |||||      ||||| ||  
  CCUUAC  CGGACC GGCU ccg uagg uuuuu      ugggg uu c
--      UU      A    g   -    u     ------     u  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR166a

• Accession: MIMAT0025327
• Description: Pinus densata pde-miR166a mature miRNA
• Sequence: 76 - UCGGACCAGGCUUCAUUCC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132