Accession
MI0019839
Description
Oryza sativa
osa-MIR5821 precursor miRNA
Sequence
1957
reads,
11.0
reads per million, 98 experiments
cuggcagUGGACGGAGCGAUGGUGGGCGgcuggcggugggcagcgggaggaagcggagcugagcagcggcggggcgaaauggagcgacagcgggcggugggcagagcgacaagggcgaagaggccggugagccaccgcuccucuuccgccuucccaucggccacccucuccaccggcgcaacgcgcgccaccGCUCCUCUCCCUCCCACCcaucgacuggugugcaccgccaacccuuucccgccgg
(((((.(.(((.((.(.(.(((((((((((((((((((((....((((((.((.(((((.(.(..((((((..(((...(((((.(...(.((.(((((((..........((((((((((((.(((((...)))))..)))))).))))))))))))).)).).).)))))....)))..))).)))..))))))).)).)))))).))))))).))))).))).)))))).)))).)))))))))
(((((.(.(((.((.(.(.(((((((((((((((((((((....((((((.((.(((((.(.(..((((((..(((...(((((.(...(.((.(((((((..........((((((((((((.(((((...)))))..)))))).))))))))))))).)).).).)))))....)))..))).)))..))))))).)).)))))).))))))).))))).))).)))))).)))).)))))))))
Structure
a U C A C A - - - cagc a c u a ca - gg -aaa c aca c g cagagcgaca - -c a
cuggc g GGA GG G G UGGUGG GCG gcugg cgguggg gggagg ag ggagc g g gcg gcg gcg uggag g g gg cgguggg agggcg aagagg cggug
||||| | ||| || | | |||||| ||| ||||| ||||||| |||||| || ||||| | | ||| ||| ||| ||||| | | || ||||||| |||||| |||||| ||||| g
ggccg c ccu uc c c accgcc cgu ugguc gcuacCC CCCUCC UC CCUCG c c cgc cgc cgc accuc c c cc gcuaccc uuccgc uucucc gccac
- - u - - a a g a ---A C U - - ac g aa ggcc u --c a g ---------- c uc c
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
12: 24605427-24605673 [+]
Database links
Mature osa-miR5821-5p
| Accession | MIMAT0023294 |
| Description | Oryza sativa osa-miR5821-5p mature miRNA |
| Sequence | 8 - UGGACGGAGCGAUGGUGGGCG - 28 |
| Evidence |
experimental
Illumina [1] |
Mature osa-miR5821-3p
| Accession | MIMAT0056293 |
| Description | Oryza sativa osa-miR5821-3p mature miRNA |
| Sequence | 193 - GCUCCUCUCCCUCCCACC - 210 |
| Evidence |
experimental
unknown |
References
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