Stem-loop osa-MIR5819

Accession

MI0019837

Description

Oryza sativa osa-MIR5819 precursor miRNA

Sequence

367 reads, 3.0 reads per million, 69 experiments

uggcaaugagAGGACGAGGGGAACGGCGGCGguggcccgcgcugcugcucgucguccuugccu
.((((.....(((((((.(((..((((((((........))))))))))).))))))))))).

Structure

u    augag       G   AA        gug 
 ggca     AGGACGA GGG  CGGCGGCG   g
 ||||     ||||||| |||  ||||||||    
 ccgu     uccugcu cuc  gucgucgc   c
u    -----       g   --        gcc 

Annotation confidence Not enough data

Genome context

1: 29695842-29695904 [+]

Mature osa-miR5819-5p

• Accession: MIMAT0023292
• Description: Oryza sativa osa-miR5819-5p mature miRNA
• Sequence: 11 - AGGACGAGGGGAACGGCGGCG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207