Stem-loop osa-MIR5818

Accession

MI0019836

Description

Oryza sativa osa-MIR5818 precursor miRNA

Literature search

2 open access papers mention osa-MIR5818
(4 sentences)

Sequence

2669 reads, 34.0 reads per million, 39 experiments

aUCGAACUAGAAGGGCCAGGUUguauuugugcuucuccuggcacucccuugguuuuuau
...(((((((.((.((((((..(((....)))....)))))).))...)))))))....

Structure

-aUC       --A  G      --UU   u 
    GAACUAG   AG GCCAGG    gua u
    |||||||   || ||||||    |||  
    uuugguu   uc cggucc    cgu u
uauu       ccc  a      ucuu   g 

Annotation confidence Not enough data

Genome context

4: 13157348-13157406 [+]

Mature osa-miR5818-5p

• Accession: MIMAT0023291
• Description: Oryza sativa osa-miR5818-5p mature miRNA
• Sequence: 2 - UCGAACUAGAAGGGCCAGGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207