Stem-loop osa-MIR5815

Accession

MI0019832

Description

Oryza sativa osa-MIR5815 precursor miRNA

Literature search

1 open access papers mention osa-MIR5815
(1 sentences)

Sequence

5939 reads, 22.0 reads per million, 132 experiments

aauguauuaAAUGUUAUGGACACUAGAUGACAUaggguugaugauggucuaauauguugucuuaugauagaaaauuaaugugucauuuggugucaaaacaaaaguuucaauu
...........((((...(((((((((((((((...((((((.....((((.((((......)))).))))..)))))))))))))))))))))..))))............

Structure

-aauguauuaAA    AUG               agg      gaugg    a    uu 
            UGUU   GACACUAGAUGACAU   guugau     ucua uaug  g
            ||||   |||||||||||||||   ||||||     |||| ||||   
            acaa   cugugguuuacugug   uaauua     agau guau  u
uuaacuuugaaa    -aa               ---      ---aa    a    uc 

Annotation confidence Not enough data

Genome context

1: 25017304-25017415 [-]

Mature osa-miR5815-5p

• Accession: MIMAT0023287
• Description: Oryza sativa osa-miR5815-5p mature miRNA
• Sequence: 10 - AAUGUUAUGGACACUAGAUGACAU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207