Stem-loop osa-MIR5811

Accession

MI0019828

Description

Oryza sativa osa-MIR5811 precursor miRNA

Sequence

2500 reads, 13.0 reads per million, 136 experiments

aaaaaaaaaaCCUAACCUAGGAGUUCGAUGGGACauaagauuauguCUCAUCCAACUUCUAGGUUAGUUUuuuuuuu
(((((((((((.(((((((((((((.(((((((((((....))))))))))).))))))))))))))))))))))))

Structure

           C             C           a 
aaaaaaaaaaC UAACCUAGGAGUU GAUGGGACaua g
||||||||||| ||||||||||||| |||||||||||  
uuuuuuuUUUG AUUGGAUCUUCAA CUACUCuguau a
           -             C           u 

Annotation confidence High

Genome context

3: 13197994-13198070 [-]

Mature osa-miR5811-5p

• Accession: MIMAT0023283
• Description: Oryza sativa osa-miR5811-5p mature miRNA
• Sequence: 11 - CCUAACCUAGGAGUUCGAUGGGAC - 34
• Evidence: experimental ; Illumina [1]

Mature osa-miR5811-3p

• Accession: MIMAT0056286
• Description: Oryza sativa osa-miR5811-3p mature miRNA
• Sequence: 47 - CUCAUCCAACUUCUAGGUUAGUUU - 70
• Evidence: experimental ; unknown

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207