Stem-loop osa-MIR5801b

Accession

MI0019825

Description

Oryza sativa osa-MIR5801b precursor miRNA

Sequence

12677 reads, 49.0 reads per million, 129 experiments

uACUAAAUCGUUUCUGAUCGUUGGAuuuagcuggauaagauAUGUAUUAUUGGAUCCAGCGAUUGgaaacaauuuggua
((((((((.(((((((((((((((((((((.((.(((...))).))...))))))))))))))))))))).))))))))

Structure

        C                     --c  g   a 
uACUAAAU GUUUCUGAUCGUUGGAuuuag   ug aua  
|||||||| |||||||||||||||||||||   || ||| g
augguuua caaagGUUAGCGACCUAGGUU   AU UAu  
        a                     AUU  G   a 

Annotation confidence Low

Genome context

9: 18739255-18739333 [+]

Mature osa-miR5801b-5p

• Accession: MIMAT0023280
• Description: Oryza sativa osa-miR5801b-5p mature miRNA
• Sequence: 2 - ACUAAAUCGUUUCUGAUCGUUGGA - 25
• Evidence: experimental ; Illumina [1]

Mature osa-miR5801b-3p

• Accession: MIMAT0056283
• Description: Oryza sativa osa-miR5801b-3p mature miRNA
• Sequence: 42 - AUGUAUUAUUGGAUCCAGCGAUUG - 65
• Evidence: experimental ; unknown

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207