Stem-loop osa-MIR5803

Accession

MI0019819

Description

Oryza sativa osa-MIR5803 precursor miRNA

Sequence

6591 reads, 27.0 reads per million, 126 experiments

uaauguuacuACCACUGUAGACGCUACGUGUGAGauaauaggaggauauaacCCACGUAUCAGCGCCUGUAAUGAUagugacauuau
(((((((((((.((.(((((.(((((((((.(..(((.........)))..).)))))...)))).))))).)).))))))))))).

Structure

-           C  C     A    ---     U AG   aua 
 uaauguuacuA CA UGUAG CGCU   ACGUG G  aua   g
 ||||||||||| || ||||| ||||   ||||| |  |||   g
 auuacagugaU GU AUGUC GCGA   UGCAC c  uau   a
u           A  A     C    CUA     C aa   agg 

Annotation confidence Medium

Genome context

4: 30231534-30231620 [+]

Mature osa-miR5803-5p

• Accession: MIMAT0023274
• Description: Oryza sativa osa-miR5803-5p mature miRNA
• Sequence: 11 - ACCACUGUAGACGCUACGUGUGAG - 34
• Evidence: experimental ; Illumina [1]

Mature osa-miR5803-3p

• Accession: MIMAT0056277
• Description: Oryza sativa osa-miR5803-3p mature miRNA
• Sequence: 53 - CCACGUAUCAGCGCCUGUAAUGAU - 76
• Evidence: experimental ; unknown

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207