Stem-loop osa-MIR5802

Accession

MI0019816

Description

Oryza sativa osa-MIR5802 precursor miRNA

Literature search

4 open access papers mention osa-MIR5802
(4 sentences)

Sequence

9387 reads, 43.0 reads per million, 134 experiments

agggauAUGGACUGUACUUUGUAAAGCGGAcucuuUCCCCUAUAUAAGGAGGGuucgugugccu
(((.(((((((((.(.(((((((.((.(((.....))).)).)))))))).))))))))).)))

Structure

   g         G A       A  C   c 
agg auAUGGACU U CUUUGUA AG GGA u
||| ||||||||| | ||||||| || ||| c
ucc ugugcuuGG A GGAAUAU UC CCU u
   g         G -       A  C   u 

Annotation confidence Low

Genome context

1: 13088727-13088790 [+]

Mature osa-miR5802-5p

• Accession: MIMAT0023271
• Description: Oryza sativa osa-miR5802-5p mature miRNA
• Sequence: 7 - AUGGACUGUACUUUGUAAAGCGGA - 30
• Evidence: experimental ; Illumina [1]

Mature osa-miR5802-3p

• Accession: MIMAT0056274
• Description: Oryza sativa osa-miR5802-3p mature miRNA
• Sequence: 36 - UCCCCUAUAUAAGGAGGG - 53
• Evidence: experimental ; unknown

References

1. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207