Stem-loop bmo-mir-2856-1

Accession

MI0012998

Description

Bombyx mori bmo-mir-2856-1 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2856-1
(1 sentences)

Sequence

1152 reads, 23.0 reads per million, 34 experiments

acuguaCUAUCUUGUCUGUGGUUCGagggugagauugucacagcaguauaggggguacauucgagaaCCGUAAGACAAUUAAUAUAAA
..((((.((..((((((.((((((..(((((..(((.((...........)).))).)))))..))))))..)))))).)).))))..

Structure

ac    C  UC      -G      Ga     ag   g  acag 
  ugua UA  UUGUCU  UGGUUC  gggug  auu uc    c
  |||| ||  ||||||  ||||||  |||||  ||| ||    a
  AUAU AU  AACAGA  GCCaag  cuuac  ugg gg    g
AA    A  -U      AU      ag     -a   g  auau 

Annotation confidence Medium

Genome context

dbj|BSVE01000021.1|: 7764042-7764129 [+]

Mature bmo-miR-2856-5p

• Accession: MIMAT0013792
• Description: Bombyx mori bmo-miR-2856-5p mature miRNA
• Sequence: 7 - CUAUCUUGUCUGUGGUUCG - 25
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2856-3p

• Accession: MIMAT0013793
• Description: Bombyx mori bmo-miR-2856-3p mature miRNA
• Sequence: 68 - CCGUAAGACAAUUAAUAUAAA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148