Stem-loop bmo-mir-2780c

Accession

MI0012451

Description

Bombyx mori bmo-mir-2780c precursor miRNA

Sequence

144 reads, 27 reads per million, 3 experiments

ccacggugaaAAGGGCGUUAAAUGAAGACUUAGggcuucgggcauauccaagaaaaacaggacaucguuugaaugcucgucuaaugga
(((....((...(((((((((((((.(.(((....(((.((......)))))......))).).))))))).)))))).))...))).

Structure

-   cggu  aAA      -       A A   --AGgg   c  gc 
 cca    ga   GGGCGU UAAAUGA G CUU      cuu gg  a
 |||    ||   |||||| ||||||| | |||      ||| ||   
 ggu    cu   cucgua guuugcu c gga      gaa cc  u
a   -aau  --g      a       a a   caaaaa   -  ua 

Annotation confidence Low

Genome context

NW_004582097.1: 19396-19483 [+]

Mature bmo-miR-2780c

• Accession: MIMAT0013760
• Description: Bombyx mori bmo-miR-2780c mature miRNA
• Sequence: 11 - AAGGGCGUUAAAUGAAGACUUAG - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148