Stem-loop bmo-mir-274

Accession

MI0010624

Description

Bombyx mori bmo-mir-274 precursor miRNA

Literature search

3 open access papers mention bmo-mir-274
(16 sentences)

Sequence

13852 reads, 2544 reads per million, 3 experiments

ggcuguuguuaggcgaaguugGUUUGUGACCGUCACUAACGGGCAGUguuaauacgguugcUCGUUUUGGCGAUCGCAAAAUGaacucgcuugac
.......(((((((((.(((.((((((((.(((((..((((((((.(((....)))..)))))))).))))).)))).)))).))))))))))))

Structure

ggcuguu         a   g    -    C     CU        -G   u 
       guuaggcga guu GUUU GUGA CGUCA  AACGGGCA  Ugu a
       ||||||||| ||| |||| |||| |||||  ||||||||  |||  
       caguucgcu caa UAAA CGCU GCGGU  UUGCUcgu  gca a
-------         -   G    A    A     -U        ug   u 

Annotation confidence High

Genome context

NW_004581747.1: 1284148-1284242 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from bmo-mir-274

Mature bmo-miR-274-5p

• Accession: MIMAT0010127
• Description: Bombyx mori bmo-miR-274-5p mature miRNA
• Sequence: 22 - GUUUGUGACCGUCACUAACGGGCAGU - 47
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-274-3p

• Accession: MIMAT0015296
• Description: Bombyx mori bmo-miR-274-3p mature miRNA
• Sequence: 62 - UCGUUUUGGCGAUCGCAAAAUG - 83
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148