Stem-loop bmo-mir-970

Accession

MI0010622

Description

Bombyx mori bmo-mir-970 precursor miRNA

Literature search

2 open access papers mention bmo-mir-970
(3 sentences)

Sequence

833 reads, 164 reads per million, 3 experiments

uggaggaauagacagAGCCUUGCGUGUGCUCUUAUUGGUAgugugacugauaaucuaUCAUAAGACACACGCGGCUCUgucugacuccagcg
(((((...(((((((((((..(((((((.((((((.(((((.((........))))))))))))))))))))))))))))))).)))))...

Structure

---     gaa           UU       C      U     u  gac 
   uggag   uagacagAGCC  GCGUGUG UCUUAU GGUAg gu   u
   |||||   |||||||||||  ||||||| |||||| ||||| ||    
   accuc   gucugUCUCGG  CGCACAC AGAAUA CUauc ua   g
gcg     --a           --       -      -     -  aua 

Annotation confidence Not enough data

Genome context

NW_004582019.1: 2368588-2368679 [+]

Mature bmo-miR-970-5p

• Accession: MIMAT0015294
• Description: Bombyx mori bmo-miR-970-5p mature miRNA
• Sequence: 16 - AGCCUUGCGUGUGCUCUUAUUGGUA - 40
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-970-3p

• Accession: MIMAT0010125
• Description: Bombyx mori bmo-miR-970-3p mature miRNA
• Sequence: 58 - UCAUAAGACACACGCGGCUCU - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148