Stem-loop bmo-mir-285

Accession

MI0009997

Description

Bombyx mori bmo-mir-285 precursor miRNA

Literature search

3 open access papers mention bmo-mir-285
(3 sentences)

Sequence

1087 reads, 15.0 reads per million, 28 experiments

uguccauguuuugacaACUGUAUUCGAGUGUGUGGAAGAguuuuaaaaauccucUAGCACCAUUCGAAUUCAGUGCucgaacgugguua
...((((((((.((..((((.(((((((((.(((..((((...........))))..)))))))))))).))))..))))))))))...

Structure

ugu        u  ca    U         U   GA    uuuu 
   ccauguuu ga  ACUG AUUCGAGUG GUG  AGAg    a
   |||||||| ||  |||| ||||||||| |||  ||||    a
   ggugcaag cu  UGAC UAAGCUUAC CAC  Ucuc    a
auu        -  CG    U         -   GA    cuaa 

Annotation confidence High

Genome context

dbj|BSVE01000022.1|: 7351061-7351149 [+]

Mature bmo-miR-285-5p

• Accession: MIMAT0053134
• Description: Bombyx mori bmo-miR-285-5p mature miRNA
• Sequence: 17 - ACUGUAUUCGAGUGUGUGGAAGA - 39
• Evidence: experimental ; cloned [1], Illumina [2]

Mature bmo-miR-285-3p

• Accession: MIMAT0009154
• Description: Bombyx mori bmo-miR-285-3p mature miRNA
• Sequence: 55 - UAGCACCAUUCGAAUUCAGUGC - 76
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 18714353
   The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
   Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
   PLoS One (2008) 3:e2997