![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence osa-MIR5079b |
|||||
Accession | MI0026007 (change log) | ||||
Description | Oryza sativa miR5079b stem-loop | ||||
Gene family | MIPF0001742; MIR5079 | ||||
Literature search |
1 open access papers mention osa-MIR5079b | ||||
Stem-loop |
--u auaa g u gg auc u agguuuacauaguuaugguucauuuacauuacccaucuaaaugauuacauaacauaaaaccuuaaugaaauggaaaaaacuuccauuuuuguguuugauuugagaaccccuugaacgccuucucaaaggguucucaaaaauucgagauagaucuaa 5' uucuu uuu gaucugu auuuu uauca ua uaggaau u ||||| ||| ||||||| ||||| ||||| || ||||||| u 3' gagaa aaa uuagaca uagaa auggu au auccuua a cuu --ag a - aa --c u gccauaaauaggucuaaaacaagagagcgauaggcaacugucccaucuccgagacaauagguuaauaauaggauuuauccuaaaaaaaagaagaugaucaggcgagauauaagguaucaccuuuaugauuuuuuaagucuuuuuucauuuucucag |
||||
Confidence |
Annotation confidence: not enough data
| ||||
Comments |
This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1]. |
||||
Genome context |
|
||||
Database links |
|
Mature sequence osa-miR5079b |
|
Accession | MIMAT0031376 |
Sequence |
11 - uuuggaucuguuauuuugguau - 32 |
Evidence | not experimental |
References |
|
1 |
PMID:21352554
"Discovery of barley miRNAs through deep sequencing of short reads"
BMC Genomics. 12:129(2011).
|