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miRBase |
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Stem-loop sequence osa-MIR5076 |
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Accession | MI0017955 (change log) | ||||
Description | Oryza sativa miR5076 stem-loop | ||||
Literature search |
1 open access papers mention osa-MIR5076 | ||||
Stem-loop |
c -gauccc u a au - -uuca uac u ua ---u a --ua g - c uu cca uu 5' aucu agccu cu uugcuuu uuuc agucaa uc uug g agaagag agaguuugagu uc gca ggu ugaguaua au g aauaau u |||| ||||| || ||||||| |||| |||||| || ||| | ||||||| ||||||||||| || ||| ||| |||||||| || | |||||| 3' uaga uugga ga gacgagg aaag ucaguu ag gac c ucuuuuc uuuuaagcuua ag cgu uca auuuauau ua c uuauug g - aaaaagu c - gu c cucuc uac - uc cagu - uaac a u c uu aag uc |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1]. |
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Genome context |
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Database links |
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Mature sequence osa-miR5076 |
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Accession | MIMAT0020564 |
Sequence |
198 - gaaaugggagcagagcagguuu - 219 |
Deep sequencing | 14 reads, 2 experiments |
Evidence | not experimental |
Database links |
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References |
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1 |
PMID:21352554
"Discovery of barley miRNAs through deep sequencing of short reads"
BMC Genomics. 12:129(2011).
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