miRBase entry: bmo-mir-3385

Stem-loop bmo-mir-3385


Accession
MI0014446
Description
Bombyx mori bmo-mir-3385 precursor miRNA


Sequence

29 reads, 10 reads per million, 3 experiments
uuaguuuugcaUGCAAACCUUACCUUCAAAGGAuauccacuguccccuaagagauaugcaacauuauaagcuccacuuucaaacacacggugucuuUGACUGUUUUGGUGUAUGGUAGAGuca
.((((.(((((((.....((((........(((((.....)))))..))))...))))))).))))...((((.(((.....(((((((((.......)))))....))))..))).))))..

Structure
uuaguuuugcaUGCAAACCUUACCUUCAAAGGAuauccacuguccccuaagagauaugcaacauuauaa    c   uucaa    ----     gu 
                                                                     gcuc acu     acac    acggu  c
                                                                     |||| |||     ||||    |||||  u
                                                                     uGAG UGG     UGUG    UGUCA  u
-------------------------------------------------------------------ac    A   ---UA    GUUU     GU 


Annotation confidence Not enough data
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Genome context
NW_004582162.1: 8709-8831 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3385
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3385-5p

Accession MIMAT0015581
Description Bombyx mori bmo-miR-3385-5p mature miRNA
Sequence 12 - UGCAAACCUUACCUUCAAAGGA - 33
Evidence experimental
SOLID [1]

Mature bmo-miR-3385-3p

Accession MIMAT0015582
Description Bombyx mori bmo-miR-3385-3p mature miRNA
Sequence 97 - UGACUGUUUUGGUGUAUGGUAGAG - 120
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415