Stem-loop bmo-mir-3382

Accession

MI0014443

Description

Bombyx mori bmo-mir-3382 precursor miRNA

Sequence

70 reads, 18 reads per million, 3 experiments

uccgcgucguugccucuUCAAGUUUUGUGUUCUGGGUCGUgccggucgcggagcucucguauguuucguacgacgucgcuucuguUGCCUCCGGACUGGAUUCUUGAACCgcagguucgaguggc
.((((.(((..(((((((((((..((..((.(((((.......(((.(((((((.((((((((...))))))).)..)).))))).))))))))))..))..))))))..).)))).))))))).

Structure

u    g   uu    - --      UU  GU  U     UCGUgcc   c     -  -u -       u 
 ccgc ucg  gccu c  uUCAAG  UU  GU CUGGG       ggu gcgga gc  c ucguaug  
 |||| |||  |||| |  ||||||  ||  || |||||       ||| ||||| ||  | ||||||| u
 ggug agc  ugga g  AAGUUC  AG  CA GGCCU       CCG ugucu cg  g agcaugc  
c    -   -u    c CC      UU  GU  -     -------   U     u  cu c       u 

Annotation confidence Not enough data

Genome context

NW_004620848.1: 33-157 [+]

Mature bmo-miR-3382-5p

• Accession: MIMAT0015575
• Description: Bombyx mori bmo-miR-3382-5p mature miRNA
• Sequence: 18 - UCAAGUUUUGUGUUCUGGGUCGU - 40
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3382-3p

• Accession: MIMAT0015576
• Description: Bombyx mori bmo-miR-3382-3p mature miRNA
• Sequence: 86 - UGCCUCCGGACUGGAUUCUUGAACC - 110
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415