miRBase entry: bmo-mir-3363

Stem-loop bmo-mir-3363


Accession
MI0014423
Description
Bombyx mori bmo-mir-3363 precursor miRNA


Sequence

72 reads, 19 reads per million, 3 experiments
ucaaauguuaaguucacuguguaucccuuguaguuaaaauaaauaaauauaauaaccuuuauguuauUCAUACGUAUUUGUGUACUGCGUUUacgggaauucuuuuuaagaucuucccauuuu
....................(((.....((((((....(((((((..(((((((((......)))))).)))..)))))))..))))))..)))(((((.((((...))))..))))).....

Structure
---------ucaaauguuaaguucacugu   ucccu      uaaa       aa   -      cu 
                             gua     uguagu    auaaaua  uau aauaac  u
                             |||     ||||||    |||||||  ||| ||||||   
                             caU     GCGUCA    UGUUUAU  AUA Uuauug  u
uuuuacccuucuagaauuuuucuuaaggg   ---UU      --UG       GC   C      ua 


Annotation confidence Not enough data
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Genome context
NW_004582218.1: 11076-11198 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3363

Accession MIMAT0015549
Description Bombyx mori bmo-miR-3363 mature miRNA
Sequence 68 - UCAUACGUAUUUGUGUACUGCGUUU - 92
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415