miRBase entry: bmo-mir-3316

Stem-loop bmo-mir-3316


Accession
MI0014374
Description
Bombyx mori bmo-mir-3316 precursor miRNA


Sequence

142 reads, 2 reads per million, 3 experiments
cggugcgacagguacggcaaucagugccgcggcaggggccgguagcuucagcuguucuauuggugcgggaaguuccaguugcgguugcucgaggguggcuggugauccauguguuagcUGCAUUACUGUUUCUUCGACUCCGu
(.((((.....)))).)..(((((((..(((((.(((((.....))))).)))))..)))))))((((((((...(((((((((((((.((.((((........)))).)).).))))))))..))))...))))....))))

Structure
cggugcgacagguacggcaaucagugccgcggcaggggccgguagcuucagcuguucuauuggu    ----    uuc    --        - u  a    ggc 
                                                                gcgg    gaag   cagu  ugcgguug c cg gggu   u
                                                                ||||    ||||   ||||  |||||||| | || ||||    
                                                                uGCC    CUUC   GUCA  ACGUcgau g gu ccua   g
----------------------------------------------------------------    UCAG    UUU    UU        u u  a    gug 


Annotation confidence Not enough data
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Genome context
NW_004623731.1: 206-348 [+]

Database links

Mature bmo-miR-3316

Accession MIMAT0015504
Description Bombyx mori bmo-miR-3316 mature miRNA
Sequence 119 - UGCAUUACUGUUUCUUCGACUCCG - 142
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415