miRBase entry: bmo-mir-3286

Stem-loop bmo-mir-3286


Accession
MI0014343
Description
Bombyx mori bmo-mir-3286 precursor miRNA
Gene family
MIPF0000086; mir-210


Sequence

3 reads, 1 reads per million, 1 experiments
augauuggcgaauaaucgaagcccaaaacAACUAUUGGUCACUGCACAGGAAuagugaaaccugcauacucUUGUGCGUGUUCCAAUAGUUAUugugggugcuucaaaaucgacauguca
.((((..((((.........(((((.((.(((((((((.(((.((((((((...(((.......)))..)))))))))))..))))))))).)).))))).........))).)..))))

Structure
a    ug -   auaaucgaa     a  c         -U   U        Aua   aa 
 ugau  g cga         gccca aa AACUAUUGG  CAC GCACAGGA   gug  a
 ||||  | |||         ||||| || |||||||||  ||| ||||||||   |||  c
 acug  c gcu         ugggu uU UUGAUAACC  GUG CGUGUUcu   uac  c
-    ua a   aaaacuucg     g  A         UU   -        -ca   gu 


Annotation confidence Not enough data
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Genome context
NW_004582008.1: 4481275-4481394 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3286
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3286-5p

Accession MIMAT0015472
Description Bombyx mori bmo-miR-3286-5p mature miRNA
Sequence 30 - AACUAUUGGUCACUGCACAGGAA - 52
Evidence experimental
SOLID [1]

Mature bmo-miR-3286-3p

Accession MIMAT0015473
Description Bombyx mori bmo-miR-3286-3p mature miRNA
Sequence 72 - UUGUGCGUGUUCCAAUAGUUAU - 93
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415