miRBase entry: bmo-mir-3247

Stem-loop bmo-mir-3247


Accession
MI0014302
Description
Bombyx mori bmo-mir-3247 precursor miRNA


Sequence

17 reads, 3 reads per million, 3 experiments
uaUUAAAUUGUAAAAAAGCGUGGGUUgccguucaggauauuaucaaaauaacccuucuacucauaucuguucauaaaauauuuauaacuacugauaccaugcaccccauguuuuuuuuuaguug
.....(((((.(((((((((((((.(((.((((((....((((..(((((........((........))........)))))))))...)))).))...))).))))))))))))).))))).

Structure
uaUUA     U             U   --c  -    gaua    ca     acccuucu  uca 
     AAUUG AAAAAAGCGUGGG Ugc   gu ucag    uuau  aaaua        ac   u
     ||||| ||||||||||||| |||   || ||||    ||||  |||||        ||    
     uugau uuuuuuuguaccc acg   ca aguc    aaua  uuuau        ug   a
----g     u             c   uac  u    -auc    --     aaaauacu  ucu 


Annotation confidence Not enough data
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Genome context
NW_004581689.1: 3671375-3671498 [+]

Database links

Mature bmo-miR-3247

Accession MIMAT0015429
Description Bombyx mori bmo-miR-3247 mature miRNA
Sequence 3 - UUAAAUUGUAAAAAAGCGUGGGUU - 26
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415