miRBase entry: bmo-mir-2856-1

Stem-loop bmo-mir-2856-1


Accession
MI0012998
Description
Bombyx mori bmo-mir-2856-1 precursor miRNA
Gene family
MIPF0001071; mir-2856

Literature search
1 open access papers mention bmo-mir-2856-1
(1 sentences)

Sequence

50 reads, 19 reads per million, 3 experiments
acuguacuaucUUGUCUGUGGUUCGAGGGUGagauugucacagcaguauaggggguACAUUCGAGAACCGUAAGACAAuuaauauaaa
..((((.((..((((((.((((((..(((((..(((.((...........)).))).)))))..))))))..)))))).)).))))..

Structure
ac    c  uc      -G      GA     ag   g  acag 
  ugua ua  UUGUCU  UGGUUC  GGGUG  auu uc    c
  |||| ||  ||||||  ||||||  |||||  ||| ||    a
  auau au  AACAGA  GCCAAG  CUUAC  ugg gg    g
aa    a  -u      AU      AG     -A   g  auau 


Annotation confidence Not enough data
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Genome context
NW_004582014.1: 3494478-3494565 [+]

Database links

Mature bmo-miR-2856-5p

Accession MIMAT0013792
Description Bombyx mori bmo-miR-2856-5p mature miRNA
Sequence 12 - UUGUCUGUGGUUCGAGGGUG - 31
Evidence experimental
Illumina [1]

Mature bmo-miR-2856-3p

Accession MIMAT0013793
Description Bombyx mori bmo-miR-2856-3p mature miRNA
Sequence 57 - ACAUUCGAGAACCGUAAGACAA - 78
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148